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Sample GSM1562895 Query DataSets for GSM1562895
Status Public on Jan 27, 2016
Title Hs_soft-tissue_MRT (hEC._.INI22)
Sample type RNA
 
Source name Malignant Rhabdoid Tumor
Organism Homo sapiens
Characteristics tissue: MRT
Extracted molecule total RNA
Extraction protocol Total RNAs were collected from samples using the miRNeasy kit (Qiagen) according to the manufacturer's instructions
Label biotin
Label protocol According to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Description Hs_soft-tissue_MRT
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.16.0.0, ENTREZG)
 
Submission date Dec 09, 2014
Last update date Mar 13, 2018
Contact name Wilfrid Richer
E-mail(s) wilfrid.richer@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL17810
Series (1)
GSE64019 Mouse Smarcb1-deficient models recapitulate subtypes of human rhabdoid tumors.
Relations
Reanalyzed by GSE111787

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1_at 4.900698733
10_at 2.12767589
100_at 5.162797858
1000_at 2.88339876
10000_at 4.218154403
100009676_at 2.105848646
10001_at 8.687187572
10002_at 2.394138331
10003_at 6.482075053
10004_at 2.239972404
100048912_at 2.188871969
100049716_at 2.408149917
10005_at 4.383394015
10006_at 8.181536755
10007_at 8.548247641
10008_at 2.39895696
10009_at 7.142860778
100093630_at 11.81662485
1001_at 2.487217343
10010_at 8.766972498

Total number of rows: 18989

Table truncated, full table size 388 Kbytes.




Supplementary file Size Download File type/resource
GSM1562895_INI22_s1p1h1_.CEL.gz 7.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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