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Sample GSM1562896 Query DataSets for GSM1562896
Status Public on Jan 27, 2016
Title Hs_soft-tissue_MRT (hEC._.INI24)
Sample type RNA
 
Source name Malignant Rhabdoid Tumor
Organism Homo sapiens
Characteristics tissue: MRT
Extracted molecule total RNA
Extraction protocol Total RNAs were collected from samples using the miRNeasy kit (Qiagen) according to the manufacturer's instructions
Label biotin
Label protocol According to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Description Hs_soft-tissue_MRT
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.16.0.0, ENTREZG)
 
Submission date Dec 09, 2014
Last update date Mar 13, 2018
Contact name Wilfrid Richer
E-mail(s) wilfrid.richer@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL17810
Series (1)
GSE64019 Mouse Smarcb1-deficient models recapitulate subtypes of human rhabdoid tumors.
Relations
Reanalyzed by GSE111787

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1_at 5.678483103
10_at 2.121994108
100_at 8.344936919
1000_at 2.99262268
10000_at 5.131499079
100009676_at 2.27416332
10001_at 6.204639465
10002_at 2.382138851
10003_at 2.631033077
10004_at 2.229280026
100048912_at 2.177821849
100049716_at 2.403590562
10005_at 6.705870245
10006_at 8.382386842
10007_at 8.969896295
10008_at 3.589394594
10009_at 6.465420102
100093630_at 10.71623565
1001_at 3.735290707
10010_at 9.130726754

Total number of rows: 18989

Table truncated, full table size 388 Kbytes.




Supplementary file Size Download File type/resource
GSM1562896_INI24_s1p1h1_.CEL.gz 7.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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