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Sample GSM1562897 Query DataSets for GSM1562897
Status Public on Jan 27, 2016
Title Hs_soft-tissue_MRT (hEC._.INI25)
Sample type RNA
 
Source name Malignant Rhabdoid Tumor
Organism Homo sapiens
Characteristics tissue: MRT
Extracted molecule total RNA
Extraction protocol Total RNAs were collected from samples using the miRNeasy kit (Qiagen) according to the manufacturer's instructions
Label biotin
Label protocol According to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Description Hs_soft-tissue_MRT
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.16.0.0, ENTREZG)
 
Submission date Dec 09, 2014
Last update date Mar 13, 2018
Contact name Wilfrid Richer
E-mail(s) wilfrid.richer@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL17810
Series (1)
GSE64019 Mouse Smarcb1-deficient models recapitulate subtypes of human rhabdoid tumors.
Relations
Reanalyzed by GSE111787

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1_at 5.326057294
10_at 2.120472947
100_at 7.172421844
1000_at 2.775203587
10000_at 3.240766525
100009676_at 2.097360217
10001_at 8.815753267
10002_at 2.375710647
10003_at 2.757654402
10004_at 4.650040559
100048912_at 2.177302433
100049716_at 2.469149456
10005_at 5.270815073
10006_at 8.015986491
10007_at 9.223217193
10008_at 2.4107508
10009_at 7.153748069
100093630_at 10.93537566
1001_at 8.092308581
10010_at 6.685071017

Total number of rows: 18989

Table truncated, full table size 388 Kbytes.




Supplementary file Size Download File type/resource
GSM1562897_INI25_s1p1h1_.CEL.gz 7.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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