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Sample GSM1562899 Query DataSets for GSM1562899
Status Public on Jan 27, 2016
Title Hs_soft-tissue_MRT (hEC._.INI38)
Sample type RNA
 
Source name Malignant Rhabdoid Tumor
Organism Homo sapiens
Characteristics tissue: MRT
Extracted molecule total RNA
Extraction protocol Total RNAs were collected from samples using the miRNeasy kit (Qiagen) according to the manufacturer's instructions
Label biotin
Label protocol According to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Description Hs_soft-tissue_MRT
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.16.0.0, ENTREZG)
 
Submission date Dec 09, 2014
Last update date Mar 13, 2018
Contact name Wilfrid Richer
E-mail(s) wilfrid.richer@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL17810
Series (1)
GSE64019 Mouse Smarcb1-deficient models recapitulate subtypes of human rhabdoid tumors.
Relations
Reanalyzed by GSE111787

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1_at 4.037320757
10_at 2.11547924
100_at 8.212480963
1000_at 4.01466664
10000_at 4.915666551
100009676_at 2.088789391
10001_at 7.417764241
10002_at 2.382353708
10003_at 2.603925544
10004_at 2.224321955
100048912_at 2.169725541
100049716_at 2.397667018
10005_at 4.937304901
10006_at 8.323664245
10007_at 9.121431482
10008_at 2.400317492
10009_at 7.162083549
100093630_at 10.31668713
1001_at 2.461918889
10010_at 7.253025091

Total number of rows: 18989

Table truncated, full table size 388 Kbytes.




Supplementary file Size Download File type/resource
GSM1562899_INI39_s1p1h1_.CEL.gz 7.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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