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Sample GSM1562900 Query DataSets for GSM1562900
Status Public on Jan 27, 2016
Title Hs_CNS_MRT (hNA._.INI39)
Sample type RNA
 
Source name Malignant Rhabdoid Tumor
Organism Homo sapiens
Characteristics tissue: MRT
Extracted molecule total RNA
Extraction protocol Total RNAs were collected from samples using the miRNeasy kit (Qiagen) according to the manufacturer's instructions
Label biotin
Label protocol According to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Description Hs_CNS_MRT
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.16.0.0, ENTREZG)
 
Submission date Dec 09, 2014
Last update date Jan 28, 2016
Contact name Wilfrid Richer
E-mail(s) wilfrid.richer@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL17810
Series (1)
GSE64019 Mouse Smarcb1-deficient models recapitulate subtypes of human rhabdoid tumors.

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1_at 4.34644842
10_at 2.127363801
100_at 3.358166101
1000_at 2.947744539
10000_at 4.428397262
100009676_at 2.098988561
10001_at 8.754675622
10002_at 2.393047865
10003_at 2.623369069
10004_at 2.227102182
100048912_at 2.182873212
100049716_at 2.395559176
10005_at 4.660025335
10006_at 8.316159258
10007_at 8.923645378
10008_at 2.365492199
10009_at 7.557733292
100093630_at 11.61630021
1001_at 7.188614576
10010_at 6.985654396

Total number of rows: 18989

Table truncated, full table size 388 Kbytes.




Supplementary file Size Download File type/resource
GSM1562900_INI3_s1p1h1_.CEL.gz 7.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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