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Sample GSM1562904 Query DataSets for GSM1562904
Status Public on Jan 27, 2016
Title Hs_soft-tissue_MRT (hEC._.INI59)
Sample type RNA
 
Source name Malignant Rhabdoid Tumor
Organism Homo sapiens
Characteristics tissue: MRT
Extracted molecule total RNA
Extraction protocol Total RNAs were collected from samples using the miRNeasy kit (Qiagen) according to the manufacturer's instructions
Label biotin
Label protocol According to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Description Hs_soft-tissue_MRT
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.16.0.0, ENTREZG)
 
Submission date Dec 09, 2014
Last update date Mar 13, 2018
Contact name Wilfrid Richer
E-mail(s) wilfrid.richer@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL17810
Series (1)
GSE64019 Mouse Smarcb1-deficient models recapitulate subtypes of human rhabdoid tumors.
Relations
Reanalyzed by GSE111787

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1_at 3.946588145
10_at 2.128349993
100_at 3.451625756
1000_at 2.999572719
10000_at 4.905649647
100009676_at 2.095052572
10001_at 8.632931463
10002_at 2.394457257
10003_at 2.642797496
10004_at 2.238800509
100048912_at 2.185062285
100049716_at 2.395953937
10005_at 5.363266658
10006_at 8.811438434
10007_at 8.311142727
10008_at 2.754055861
10009_at 7.133322072
100093630_at 9.985791304
1001_at 6.81478669
10010_at 8.53362823

Total number of rows: 18989

Table truncated, full table size 388 Kbytes.




Supplementary file Size Download File type/resource
GSM1562904_INI59_batch1.CEL.gz 4.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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