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Sample GSM1562913 Query DataSets for GSM1562913
Status Public on Jan 27, 2016
Title Hs_CNS_MRT (hIC1._.INI162)
Sample type RNA
 
Source name Atypical Teratoid and Rhabdoid Tumor
Organism Homo sapiens
Characteristics tissue: ATRT
Extracted molecule total RNA
Extraction protocol Total RNAs were collected from samples using the miRNeasy kit (Qiagen) according to the manufacturer's instructions
Label biotin
Label protocol According to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Description Hs_CNS_MRT
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.16.0.0, ENTREZG)
 
Submission date Dec 09, 2014
Last update date Mar 26, 2019
Contact name Wilfrid Richer
E-mail(s) wilfrid.richer@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL17810
Series (1)
GSE64019 Mouse Smarcb1-deficient models recapitulate subtypes of human rhabdoid tumors.
Relations
Reanalyzed by GSE111787

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1_at 4.330439178
10_at 2.142842499
100_at 3.793148887
1000_at 11.01215367
10000_at 4.991511505
100009676_at 2.114154075
10001_at 7.400452958
10002_at 2.406047856
10003_at 2.707653066
10004_at 2.255211627
100048912_at 2.210786983
100049716_at 2.414571993
10005_at 5.698779044
10006_at 8.405661215
10007_at 10.4577082
10008_at 2.424047763
10009_at 6.851118764
100093630_at 8.367065876
1001_at 9.670114434
10010_at 7.001760375

Total number of rows: 18989

Table truncated, full table size 388 Kbytes.




Supplementary file Size Download File type/resource
GSM1562913_MD13_ARN0008_s1h1_U133p2.CEL.gz 4.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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