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Sample GSM1562917 Query DataSets for GSM1562917
Status Public on Jan 27, 2016
Title Hs_CNS_MRT (hIC1._.INI84)
Sample type RNA
 
Source name Atypical Teratoid and Rhabdoid Tumor
Organism Homo sapiens
Characteristics tissue: ATRT
Extracted molecule total RNA
Extraction protocol Total RNAs were collected from samples using the miRNeasy kit (Qiagen) according to the manufacturer's instructions
Label biotin
Label protocol According to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Description Hs_CNS_MRT
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.16.0.0, ENTREZG)
 
Submission date Dec 09, 2014
Last update date Mar 26, 2019
Contact name Wilfrid Richer
E-mail(s) wilfrid.richer@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL17810
Series (1)
GSE64019 Mouse Smarcb1-deficient models recapitulate subtypes of human rhabdoid tumors.
Relations
Reanalyzed by GSE111787

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1_at 4.067178234
10_at 2.126469695
100_at 3.511919204
1000_at 11.09773178
10000_at 5.511694177
100009676_at 2.100934464
10001_at 7.164142331
10002_at 2.376269949
10003_at 2.624465302
10004_at 2.234426708
100048912_at 2.186503484
100049716_at 2.410799719
10005_at 4.896765961
10006_at 8.68222542
10007_at 9.72392623
10008_at 2.559812537
10009_at 7.020953427
100093630_at 8.227536263
1001_at 9.568374483
10010_at 7.304379173

Total number of rows: 18989

Table truncated, full table size 388 Kbytes.




Supplementary file Size Download File type/resource
GSM1562917_MD04_ARN0001_s1h1_U133p2.CEL.gz 4.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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