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Sample GSM1562918 Query DataSets for GSM1562918
Status Public on Jan 27, 2016
Title Hs_CNS_MRT (hIC1._.INI87)
Sample type RNA
 
Source name Atypical Teratoid and Rhabdoid Tumor
Organism Homo sapiens
Characteristics tissue: ATRT
Extracted molecule total RNA
Extraction protocol Total RNAs were collected from samples using the miRNeasy kit (Qiagen) according to the manufacturer's instructions
Label biotin
Label protocol According to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Description Hs_CNS_MRT
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.16.0.0, ENTREZG)
 
Submission date Dec 09, 2014
Last update date Mar 26, 2019
Contact name Wilfrid Richer
E-mail(s) wilfrid.richer@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL17810
Series (1)
GSE64019 Mouse Smarcb1-deficient models recapitulate subtypes of human rhabdoid tumors.
Relations
Reanalyzed by GSE111787

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1_at 3.774605399
10_at 2.117586368
100_at 3.199910044
1000_at 10.80150987
10000_at 5.317829017
100009676_at 2.09385659
10001_at 7.46381196
10002_at 2.371617125
10003_at 2.615018716
10004_at 2.221367311
100048912_at 2.178064443
100049716_at 2.409579918
10005_at 5.277897459
10006_at 8.512190043
10007_at 9.744690034
10008_at 2.418399444
10009_at 7.119961783
100093630_at 7.98240292
1001_at 8.701915112
10010_at 7.45896068

Total number of rows: 18989

Table truncated, full table size 388 Kbytes.




Supplementary file Size Download File type/resource
GSM1562918_MD04_ARN0003_s1h1_U133p2.CEL.gz 4.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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