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Sample GSM1562930 Query DataSets for GSM1562930
Status Public on Jan 27, 2016
Title Hs_CNS_MRT (hIC2._.INI94)
Sample type RNA
 
Source name Atypical Teratoid and Rhabdoid Tumor
Organism Homo sapiens
Characteristics tissue: ATRT
Extracted molecule total RNA
Extraction protocol Total RNAs were collected from samples using the miRNeasy kit (Qiagen) according to the manufacturer's instructions
Label biotin
Label protocol According to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Description Hs_CNS_MRT
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.16.0.0, ENTREZG)
 
Submission date Dec 09, 2014
Last update date Mar 26, 2019
Contact name Wilfrid Richer
E-mail(s) wilfrid.richer@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL17810
Series (1)
GSE64019 Mouse Smarcb1-deficient models recapitulate subtypes of human rhabdoid tumors.
Relations
Reanalyzed by GSE111787

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1_at 4.076091374
10_at 2.145963438
100_at 3.454451711
1000_at 8.723167491
10000_at 5.252519069
100009676_at 2.117882753
10001_at 6.815919438
10002_at 2.410851071
10003_at 9.322364456
10004_at 2.260922282
100048912_at 2.210891951
100049716_at 2.418127244
10005_at 4.116588482
10006_at 8.060407323
10007_at 8.683045909
10008_at 2.423497891
10009_at 7.495771401
100093630_at 9.512594432
1001_at 4.913196158
10010_at 7.137852626

Total number of rows: 18989

Table truncated, full table size 388 Kbytes.




Supplementary file Size Download File type/resource
GSM1562930_MD04_ARN0010_s1h1_U133p2.CEL.gz 4.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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