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Sample GSM1562934 Query DataSets for GSM1562934
Status Public on Jan 27, 2016
Title Hs_CNS_MRT (hIC3._.INI166)
Sample type RNA
 
Source name Atypical Teratoid and Rhabdoid Tumor
Organism Homo sapiens
Characteristics tissue: ATRT
Extracted molecule total RNA
Extraction protocol Total RNAs were collected from samples using the miRNeasy kit (Qiagen) according to the manufacturer's instructions
Label biotin
Label protocol According to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Description Hs_CNS_MRT
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.16.0.0, ENTREZG)
 
Submission date Dec 09, 2014
Last update date Mar 26, 2019
Contact name Wilfrid Richer
E-mail(s) wilfrid.richer@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL17810
Series (1)
GSE64019 Mouse Smarcb1-deficient models recapitulate subtypes of human rhabdoid tumors.
Relations
Reanalyzed by GSE111787

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1_at 5.610880264
10_at 2.1577573
100_at 7.76472209
1000_at 11.5116414
10000_at 4.159889533
100009676_at 2.132676404
10001_at 7.364507231
10002_at 2.428671342
10003_at 2.758494954
10004_at 2.282586959
100048912_at 2.231997576
100049716_at 2.511026185
10005_at 5.487910759
10006_at 8.754014367
10007_at 10.12581937
10008_at 2.544159902
10009_at 7.141044118
100093630_at 9.109000241
1001_at 7.000638667
10010_at 7.611706693

Total number of rows: 18989

Table truncated, full table size 388 Kbytes.




Supplementary file Size Download File type/resource
GSM1562934_MD13_ARN0012_s1h1_U133p2.CEL.gz 4.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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