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Sample GSM1562935 Query DataSets for GSM1562935
Status Public on Jan 27, 2016
Title Hs_CNS_MRT (hIC3._.INI170)
Sample type RNA
 
Source name Atypical Teratoid and Rhabdoid Tumor
Organism Homo sapiens
Characteristics tissue: ATRT
Extracted molecule total RNA
Extraction protocol Total RNAs were collected from samples using the miRNeasy kit (Qiagen) according to the manufacturer's instructions
Label biotin
Label protocol According to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Description Hs_CNS_MRT
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.16.0.0, ENTREZG)
 
Submission date Dec 09, 2014
Last update date Mar 26, 2019
Contact name Wilfrid Richer
E-mail(s) wilfrid.richer@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL17810
Series (1)
GSE64019 Mouse Smarcb1-deficient models recapitulate subtypes of human rhabdoid tumors.
Relations
Reanalyzed by GSE111787

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1_at 4.072234249
10_at 2.14039176
100_at 4.960995476
1000_at 9.648811638
10000_at 3.223247106
100009676_at 2.111361867
10001_at 7.061989206
10002_at 2.403518903
10003_at 2.701359946
10004_at 2.257207684
100048912_at 2.207238037
100049716_at 2.43818636
10005_at 5.273083967
10006_at 8.952082368
10007_at 9.569992735
10008_at 2.440927355
10009_at 7.179901011
100093630_at 8.815067328
1001_at 2.711860439
10010_at 7.369037178

Total number of rows: 18989

Table truncated, full table size 388 Kbytes.




Supplementary file Size Download File type/resource
GSM1562935_MD13_ARN0016_s1h1_U133p2.CEL.gz 4.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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