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Sample GSM1562938 Query DataSets for GSM1562938
Status Public on Jan 27, 2016
Title Hs_CNS_MB-SHH (hMB._.MB141)
Sample type RNA
 
Source name Medulloblastoma SHH
Organism Homo sapiens
Characteristics tissue: MB_SHH
Extracted molecule total RNA
Extraction protocol Total RNAs were collected from samples using the miRNeasy kit (Qiagen) according to the manufacturer's instructions
Label biotin
Label protocol According to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Description Hs_CNS_MB-SHH
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.16.0.0, ENTREZG)
 
Submission date Dec 09, 2014
Last update date Jan 28, 2016
Contact name Wilfrid Richer
E-mail(s) wilfrid.richer@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL17810
Series (1)
GSE64019 Mouse Smarcb1-deficient models recapitulate subtypes of human rhabdoid tumors.

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1_at 3.393773973
10_at 2.117102016
100_at 2.461138384
1000_at 9.438986715
10000_at 6.537476495
100009676_at 2.092892095
10001_at 7.94000507
10002_at 2.371448448
10003_at 2.604081675
10004_at 2.222104302
100048912_at 2.170532006
100049716_at 2.348572873
10005_at 5.604151535
10006_at 8.54150058
10007_at 8.629655998
10008_at 2.355060781
10009_at 8.347621278
100093630_at 10.29153067
1001_at 2.136399246
10010_at 7.340178909

Total number of rows: 18989

Table truncated, full table size 388 Kbytes.




Supplementary file Size Download File type/resource
GSM1562938_MB141_U133plus2.0_061205.CEL.gz 7.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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