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Sample GSM1562941 Query DataSets for GSM1562941
Status Public on Jan 27, 2016
Title Hs_CNS_MRT (hNA._.INI108)
Sample type RNA
 
Source name Atypical Teratoid and Rhabdoid Tumor
Organism Homo sapiens
Characteristics tissue: ATRT
Extracted molecule total RNA
Extraction protocol Total RNAs were collected from samples using the miRNeasy kit (Qiagen) according to the manufacturer's instructions
Label biotin
Label protocol According to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Description Hs_CNS_MRT
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.16.0.0, ENTREZG)
 
Submission date Dec 09, 2014
Last update date Mar 26, 2019
Contact name Wilfrid Richer
E-mail(s) wilfrid.richer@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL17810
Series (1)
GSE64019 Mouse Smarcb1-deficient models recapitulate subtypes of human rhabdoid tumors.
Relations
Reanalyzed by GSE111787

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1_at 4.055398176
10_at 2.161325175
100_at 5.533821437
1000_at 4.91410241
10000_at 4.841193011
100009676_at 2.13832099
10001_at 8.568740399
10002_at 2.438508768
10003_at 2.764164398
10004_at 2.291788085
100048912_at 2.241116542
100049716_at 2.431388443
10005_at 4.195671017
10006_at 8.684530547
10007_at 9.936350021
10008_at 2.5193229
10009_at 7.045839203
100093630_at 9.37512368
1001_at 3.710780365
10010_at 7.471182519

Total number of rows: 18989

Table truncated, full table size 388 Kbytes.




Supplementary file Size Download File type/resource
GSM1562941_MD04_ARN0022_s1h1_U133p2.CEL.gz 4.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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