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Sample GSM157170 Query DataSets for GSM157170
Status Public on May 05, 2007
Title SK-Mel-28 Human Cell Lines_affs431-MTf/B1
Sample type RNA
 
Source name Human Melanotransferrin Downregulation - SK-Mel-28 Cell Line - MTf/B1
Organism Homo sapiens
Characteristics Cell Line: SK-Mel-28
Expression Vector: pSilencerâ„¢ 3.1-H1 neo
Inserted Gene: Human Melanotransferrin siRNA (NM_005929; position: 2048-2066 bp)
Extracted molecule total RNA
Extraction protocol Standard TRIzol RNA Extraction Protocol
Label Biotin
Label protocol Standard Affymetrix Protocol
 
Hybridization protocol Standard Affymetrix Protocol
Scan protocol Standard Affymetrix Protocol, GeneChip Scanner 3000
Description Standard Affymetrix Protocol on total RNA extracted from SK-Mel-28 cell line
Data processing GeneChip Scanner 3000, GCOS v1.3, scaled to 1000
 
Submission date Jan 21, 2007
Last update date Aug 28, 2018
Contact name Des Raymond Richardson
E-mail(s) d.richardson@med.usyd.edu.au
Organization name University of Sydney
Department Bosch Institute
Lab Pathology
Street address 92-94 Parramatta Rd, Sydney
City Sydney
State/province New South Wales
ZIP/Postal code 2006
Country Australia
 
Platform ID GPL570
Series (2)
GSE6817 Downregulation of Human Melanotransferrin on SK-Mel-28 Cell Line
GSE6833 Hyperexpression and Downregulation of Melanotransferrin on Various Cell Lines
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE Signal
ABS_CALL Flagged as present, absent, or marginal by Affymetrix

Data table
ID_REF VALUE ABS_CALL
AFFX-BioB-5_at 546.6 P
AFFX-BioB-M_at 896.2 P
AFFX-BioB-3_at 496.9 P
AFFX-BioC-5_at 1816.1 P
AFFX-BioC-3_at 2134.8 P
AFFX-BioDn-5_at 4554.7 P
AFFX-BioDn-3_at 7835.7 P
AFFX-CreX-5_at 23287.5 P
AFFX-CreX-3_at 28552.2 P
AFFX-DapX-5_at 2776.1 P
AFFX-DapX-M_at 8289.5 P
AFFX-DapX-3_at 9343.4 P
AFFX-LysX-5_at 442.6 P
AFFX-LysX-M_at 687.2 P
AFFX-LysX-3_at 1942.4 P
AFFX-PheX-5_at 696 P
AFFX-PheX-M_at 1065.6 P
AFFX-PheX-3_at 887.5 P
AFFX-ThrX-5_at 811.1 P
AFFX-ThrX-M_at 1348 P

Total number of rows: 54675

Table truncated, full table size 984 Kbytes.




Supplementary file Size Download File type/resource
GSM157170.CEL.gz 5.0 Mb (ftp)(http) CEL

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