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Sample GSM157179 Query DataSets for GSM157179
Status Public on Jan 20, 2008
Title Au_Time2hoursSize15nmreplicate0Concentration10%
Sample type RNA
 
Source name Human Skin Fibroblast
Organism Homo sapiens
Characteristics Young male
Treatment protocol Au particles of 15nm were added in culture medium at concentration of 10%. Cells were collected 2hours after treatment.
Growth protocol Cells were 100% confluent when treatment.
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy mini kit
Label biotin
Label protocol Illumina TotalPrep
 
Hybridization protocol Illumina Standard protocol
Scan protocol Illumina scanner
Description Gene expression data of Human Skin Fibroblast treated with Au nanoparticles
Data processing The data was analyzed with bioconductor and GeneSpring
 
Submission date Jan 22, 2007
Last update date Feb 12, 2007
Contact name Lianghao Ding
E-mail(s) lianghao.ding@utsouthwestern.edu
Phone 214-648-5892
Organization name UT Southwestern Medical Center
Street address 5323 Harry Hines Blvd
City Dallas
State/province TX
ZIP/Postal code 75390
Country USA
 
Platform ID GPL2507
Series (1)
GSE6818 Cell response to Au nanoparticles

Data table header descriptions
ID_REF TargetID
VALUE Signal intensity after Quantile normalization

Data table
ID_REF VALUE
pheA 115.44102
lysA 133.94356
trpF 132.64099
GI_10047089-S 114.576904
GI_10047091-S 148.81284
GI_10047093-S 1265.9873
GI_10047099-S 214.29742
GI_10047103-S 2589.8184
GI_10047105-S 152.18463
GI_10047121-S 123.392296
GI_10047123-S 260.59482
GI_10047133-A 145.24614
GI_10047133-I 126.182045
GI_10092578-S 132.75641
GI_10092585-S 241.82054
GI_10092596-S 236.64865
GI_10092600-S 722.37427
GI_10092602-S 122.80772
GI_10092603-S 126.07691
GI_10092611-A 1869.2388

Total number of rows: 47292

Table truncated, full table size 1048 Kbytes.




Supplementary file Size Download File type/resource
GSM157179.txt.gz 233.1 Kb (ftp)(http) TXT

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