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Sample GSM157180 Query DataSets for GSM157180
Status Public on Jan 20, 2008
Title Au_Time2hoursSize15nmreplicate0Concentration100%
Sample type RNA
 
Source name Human Skin Fibroblast
Organism Homo sapiens
Characteristics Young male
Treatment protocol Au particles of 15nm were added in culture medium at concentration of 100%. Cells were collected 2hours after treatment.
Growth protocol Cells were 100% confluent when treatment.
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy mini kit
Label biotin
Label protocol Illumina TotalPrep
 
Hybridization protocol Illumina Standard protocol
Scan protocol Illumina scanner
Description Gene expression data of Human Skin Fibroblast treated with Au nanoparticles
Data processing The data was analyzed with bioconductor and GeneSpring
 
Submission date Jan 22, 2007
Last update date Feb 12, 2007
Contact name Lianghao Ding
E-mail(s) lianghao.ding@utsouthwestern.edu
Phone 214-648-5892
Organization name UT Southwestern Medical Center
Street address 5323 Harry Hines Blvd
City Dallas
State/province TX
ZIP/Postal code 75390
Country USA
 
Platform ID GPL2507
Series (1)
GSE6818 Cell response to Au nanoparticles

Data table header descriptions
ID_REF TargetID
VALUE Signal intensity after Quantile normalization

Data table
ID_REF VALUE
pheA 117.235916
lysA 126.95128
trpF 129.56151
GI_10047089-S 103.220505
GI_10047091-S 127.597435
GI_10047093-S 1117.3641
GI_10047099-S 303.82825
GI_10047103-S 2251.2742
GI_10047105-S 140.43846
GI_10047121-S 125.274376
GI_10047123-S 255.31026
GI_10047133-A 122.22048
GI_10047133-I 129.04102
GI_10092578-S 139.58203
GI_10092585-S 225.74875
GI_10092596-S 248.87947
GI_10092600-S 622.58453
GI_10092602-S 127.9
GI_10092603-S 128.72562
GI_10092611-A 2015.6105

Total number of rows: 47292

Table truncated, full table size 1047 Kbytes.




Supplementary file Size Download File type/resource
GSM157180.txt.gz 231.8 Kb (ftp)(http) TXT

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