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Sample GSM157194 Query DataSets for GSM157194
Status Public on Jan 20, 2008
Title Au_Time8hoursSize200nmreplicate0Concentration100%
Sample type RNA
 
Source name Human Skin Fibroblast
Organism Homo sapiens
Characteristics Young male
Treatment protocol Au particles of 200nm were added in culture medium at concentration of 100%. Cells were collected 8hours after treatment.
Growth protocol Cells were 100% confluent when treatment.
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy mini kit
Label biotin
Label protocol Illumina TotalPrep
 
Hybridization protocol Illumina Standard protocol
Scan protocol Illumina scanner
Description Gene expression data of Human Skin Fibroblast treated with Au nanoparticles
Data processing The data was analyzed with bioconductor and GeneSpring
 
Submission date Jan 22, 2007
Last update date Feb 12, 2007
Contact name Lianghao Ding
E-mail(s) lianghao.ding@utsouthwestern.edu
Phone 214-648-5892
Organization name UT Southwestern Medical Center
Street address 5323 Harry Hines Blvd
City Dallas
State/province TX
ZIP/Postal code 75390
Country USA
 
Platform ID GPL2507
Series (1)
GSE6818 Cell response to Au nanoparticles

Data table header descriptions
ID_REF TargetID
VALUE Signal intensity after Quantile normalization

Data table
ID_REF VALUE
pheA 119.574356
lysA 131.64104
trpF 126.30768
GI_10047089-S 114.969246
GI_10047091-S 162.73592
GI_10047093-S 1095.6228
GI_10047099-S 249.90002
GI_10047103-S 2343.1235
GI_10047105-S 158.50511
GI_10047121-S 105.94105
GI_10047123-S 237.34105
GI_10047133-A 116.20001
GI_10047133-I 147.37439
GI_10092578-S 126.64359
GI_10092585-S 284.79486
GI_10092596-S 274.7641
GI_10092600-S 740.441
GI_10092602-S 115.625626
GI_10092603-S 107.82562
GI_10092611-A 1487.9254

Total number of rows: 47292

Table truncated, full table size 1046 Kbytes.




Supplementary file Size Download File type/resource
GSM157194.txt.gz 229.4 Kb (ftp)(http) TXT

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