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Sample GSM157198 Query DataSets for GSM157198
Status Public on Jan 20, 2008
Title Au_Time8hoursSize30nmreplicate0Concentration100%
Sample type RNA
 
Source name Human Skin Fibroblast
Organism Homo sapiens
Characteristics Young male
Treatment protocol Au particles of 30nm were added in culture medium at concentration of 100%. Cells were collected 8hours after treatment.
Growth protocol Cells were 100% confluent when treatment.
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy mini kit
Label biotin
Label protocol Illumina TotalPrep
 
Hybridization protocol Illumina Standard protocol
Scan protocol Illumina scanner
Description Gene expression data of Human Skin Fibroblast treated with Au nanoparticles
Data processing The data was analyzed with bioconductor and GeneSpring
 
Submission date Jan 22, 2007
Last update date Feb 12, 2007
Contact name Lianghao Ding
E-mail(s) lianghao.ding@utsouthwestern.edu
Phone 214-648-5892
Organization name UT Southwestern Medical Center
Street address 5323 Harry Hines Blvd
City Dallas
State/province TX
ZIP/Postal code 75390
Country USA
 
Platform ID GPL2507
Series (1)
GSE6818 Cell response to Au nanoparticles

Data table header descriptions
ID_REF TargetID
VALUE Signal intensity after Quantile normalization

Data table
ID_REF VALUE
pheA 115.78464
lysA 131.94614
trpF 125.76666
GI_10047089-S 104.4718
GI_10047091-S 157.84357
GI_10047093-S 1089.0413
GI_10047099-S 187.03336
GI_10047103-S 2264.0386
GI_10047105-S 133.2154
GI_10047121-S 119.38208
GI_10047123-S 277.2026
GI_10047133-A 104.756386
GI_10047133-I 118.66153
GI_10092578-S 117.458954
GI_10092585-S 266.03583
GI_10092596-S 271.9205
GI_10092600-S 784.1717
GI_10092602-S 123.13332
GI_10092603-S 128.39232
GI_10092611-A 1569.5076

Total number of rows: 47292

Table truncated, full table size 1048 Kbytes.




Supplementary file Size Download File type/resource
GSM157198.txt.gz 235.4 Kb (ftp)(http) TXT

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