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Sample GSM157201 Query DataSets for GSM157201
Status Public on Jan 20, 2008
Title Au_Time8hoursSize40nmreplicate0Concentration10%
Sample type RNA
 
Source name Human Skin Fibroblast
Organism Homo sapiens
Characteristics Young male
Treatment protocol Au particles of 40nm were added in culture medium at concentration of 10%. Cells were collected 8hours after treatment.
Growth protocol Cells were 100% confluent when treatment.
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy mini kit
Label biotin
Label protocol Illumina TotalPrep
 
Hybridization protocol Illumina Standard protocol
Scan protocol Illumina scanner
Description Gene expression data of Human Skin Fibroblast treated with Au nanoparticles
Data processing The data was analyzed with bioconductor and GeneSpring
 
Submission date Jan 22, 2007
Last update date Feb 12, 2007
Contact name Lianghao Ding
E-mail(s) lianghao.ding@utsouthwestern.edu
Phone 214-648-5892
Organization name UT Southwestern Medical Center
Street address 5323 Harry Hines Blvd
City Dallas
State/province TX
ZIP/Postal code 75390
Country USA
 
Platform ID GPL2507
Series (1)
GSE6818 Cell response to Au nanoparticles

Data table header descriptions
ID_REF TargetID
VALUE Signal intensity after Quantile normalization

Data table
ID_REF VALUE
pheA 121.846146
lysA 129.52309
trpF 123.33588
GI_10047089-S 110.341
GI_10047091-S 138.19485
GI_10047093-S 1124.6387
GI_10047099-S 240.98979
GI_10047103-S 2175.3972
GI_10047105-S 132.9564
GI_10047121-S 128.3564
GI_10047123-S 247.40517
GI_10047133-A 112.95384
GI_10047133-I 106.94617
GI_10092578-S 123.74105
GI_10092585-S 263.0128
GI_10092596-S 251.90253
GI_10092600-S 795.8923
GI_10092602-S 112.57181
GI_10092603-S 146.74615
GI_10092611-A 1541.9464

Total number of rows: 47292

Table truncated, full table size 1047 Kbytes.




Supplementary file Size Download File type/resource
GSM157201.txt.gz 236.3 Kb (ftp)(http) TXT

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