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Sample GSM157207 Query DataSets for GSM157207
Status Public on Jan 20, 2008
Title Au_Time2hoursSize80nmreplicate0Concentration10%
Sample type RNA
 
Source name Human Skin Fibroblast
Organism Homo sapiens
Characteristics Young male
Treatment protocol Au particles of 80nm were added in culture medium at concentration of 10%. Cells were collected 2hours after treatment.
Growth protocol Cells were 100% confluent when treatment.
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy mini kit
Label biotin
Label protocol Illumina TotalPrep
 
Hybridization protocol Illumina Standard protocol
Scan protocol Illumina scanner
Description Gene expression data of Human Skin Fibroblast treated with Au nanoparticles
Data processing The data was analyzed with bioconductor and GeneSpring
 
Submission date Jan 22, 2007
Last update date Feb 12, 2007
Contact name Lianghao Ding
E-mail(s) lianghao.ding@utsouthwestern.edu
Phone 214-648-5892
Organization name UT Southwestern Medical Center
Street address 5323 Harry Hines Blvd
City Dallas
State/province TX
ZIP/Postal code 75390
Country USA
 
Platform ID GPL2507
Series (1)
GSE6818 Cell response to Au nanoparticles

Data table header descriptions
ID_REF TargetID
VALUE Signal intensity after Quantile normalization

Data table
ID_REF VALUE
pheA 117.35897
lysA 130.48207
trpF 125.305145
GI_10047089-S 99.83844
GI_10047091-S 149.7718
GI_10047093-S 1034.0436
GI_10047099-S 249.65121
GI_10047103-S 2264.0386
GI_10047105-S 156.16667
GI_10047121-S 127.51539
GI_10047123-S 237.63843
GI_10047133-A 109.67178
GI_10047133-I 126.25125
GI_10092578-S 127.06665
GI_10092585-S 237.50261
GI_10092596-S 214.67441
GI_10092600-S 678.13586
GI_10092602-S 116.374344
GI_10092603-S 152.7231
GI_10092611-A 1646.2979

Total number of rows: 47292

Table truncated, full table size 1047 Kbytes.




Supplementary file Size Download File type/resource
GSM157207.txt.gz 233.1 Kb (ftp)(http) TXT

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