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Sample GSM157210 Query DataSets for GSM157210
Status Public on Jan 20, 2008
Title Au_Time8hoursSize80nmreplicate0Concentration100%
Sample type RNA
 
Source name Human Skin Fibroblast
Organism Homo sapiens
Characteristics Young male
Treatment protocol Au particles of 80nm were added in culture medium at concentration of 100%. Cells were collected 8hours after treatment.
Growth protocol Cells were 100% confluent when treatment.
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy mini kit
Label biotin
Label protocol Illumina TotalPrep
 
Hybridization protocol Illumina Standard protocol
Scan protocol Illumina scanner
Description Gene expression data of Human Skin Fibroblast treated with Au nanoparticles
Data processing The data was analyzed with bioconductor and GeneSpring
 
Submission date Jan 22, 2007
Last update date Feb 12, 2007
Contact name Lianghao Ding
E-mail(s) lianghao.ding@utsouthwestern.edu
Phone 214-648-5892
Organization name UT Southwestern Medical Center
Street address 5323 Harry Hines Blvd
City Dallas
State/province TX
ZIP/Postal code 75390
Country USA
 
Platform ID GPL2507
Series (1)
GSE6818 Cell response to Au nanoparticles

Data table header descriptions
ID_REF TargetID
VALUE Signal intensity after Quantile normalization

Data table
ID_REF VALUE
pheA 118.51536
lysA 134.8667
trpF 133.14102
GI_10047089-S 131.9744
GI_10047091-S 161.11794
GI_10047093-S 966.8257
GI_10047099-S 238.35385
GI_10047103-S 2657.2004
GI_10047105-S 145.36926
GI_10047121-S 126.40257
GI_10047123-S 247.03595
GI_10047133-A 125.21537
GI_10047133-I 137.48973
GI_10092578-S 137.62051
GI_10092585-S 284.1538
GI_10092596-S 296.83084
GI_10092600-S 701.96936
GI_10092602-S 136.88463
GI_10092603-S 135.0872
GI_10092611-A 1767.3462

Total number of rows: 47292

Table truncated, full table size 1049 Kbytes.




Supplementary file Size Download File type/resource
GSM157210.txt.gz 231.9 Kb (ftp)(http) TXT

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