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Sample GSM157734

Query DataSets for GSM157734

Status

Public on Mar 22, 2007

Title

Wt 1stInstar larvae rep2

Sample type

RNA

Source name

Wt 1st instar larvae

Organism

Drosophila melanogaster

Characteristics

Gender: mixed
Tissue: mixed

Extracted molecule

total RNA

Extraction protocol

Total RNA was isolated using TRIzol reagent (Invitrogen) followed by a purification using RNeasy kit (Qiagen) according to the instruction by the suppliers.

Label

Biotin

Label protocol

Standard Affymetrix

Hybridization protocol

Standard Affymetrix

Scan protocol

Standard Affymetrix

Description

Gene expression data from whole 1st instar larvae (Wt and pof mutant).

Data processing

Raw data was normalized using RMA (R and Bioconductor)

Submission date

Jan 23, 2007

Last update date

Aug 28, 2018

Contact name

Jan Larsson

E-mail(s)

jan.larsson@molbiol.umu.se

Organization name

Umea University

Department

Molecular Biology

Lab

Jan Larsson

Street address

Umea University

City

Umea

ZIP/Postal code

SE-90187

Country

Sweden

Platform ID

GPL1322

Series (1)

GSE6839

Pof D119 mutant expression analysis

Relations

Reanalyzed by

GSE119084

Data table header descriptions
ID_REF
VALUE	RMA

Data table
ID_REF	VALUE
1616608_a_at	13.09408163
1622892_s_at	8.396280477
1622893_at	7.592556775
1622894_at	7.197883747
1622895_at	7.757500735
1622896_at	6.289553348
1622897_at	7.35155168
1622898_a_at	9.105230481
1622899_at	4.479461956
1622900_at	4.237589149
1622901_at	8.233475056
1622902_at	11.74917439
1622903_s_at	8.325725355
1622904_at	5.389127663
1622905_at	4.200616308
1622906_at	8.946918297
1622907_at	9.247401044
1622908_a_at	7.783010932
1622909_at	8.470256427
1622910_at	4.86057769

Total number of rows: 18952

Table truncated, full table size 432 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM157734.CEL.gz	2.2 Mb	(ftp)(http)	CEL