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GEO accession:
Sample GSM157862
Query DataSets for GSM157862
Status
Public on Jun 15, 2007
Title
Dominant negative cJun VZ17
Sample type
RNA
Source name
liver
Organism
Mus musculus
Characteristics
ApoE-/- mouse infected wtih an adenovirus expressing dominant negative cJun
Extracted molecule
total RNA
Extraction protocol
Affymetrix
Label
biotin
Label protocol
Affymetrix
Hybridization protocol
Affymetrix
Scan protocol
Affymetrix
Description
total RNA extracted from one ApoE-/- mouse infected wtih an adenovirus expressing dominant negative cJun
Data processing
SAM
Submission date
Jan 24, 2007
Last update date
Aug 28, 2018
Contact name
Despina Sanoudou
E-mail(s)
dsanoudo@enders.tch.harvard.edu
Phone
+30-210-6597453
Fax
+30-210-6597545
Organization name
Foundation for Biomedical Research, Academy of Athens
Department
Molecular Biology
Lab
Sanoudou Lab
Street address
Soranou Efesiou 4
City
Athens
ZIP/Postal code
115 27
Country
Greece
Platform ID
GPL1261
Series (1)
GSE6850
A dominant negative form of cJun affects genes that have opposing effects on lipid homeostasis in mice
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
VZ17_Signal
Affymetrix Signal
VZ17_Detection
Affymetrix Detection Call
VZ17_Detection p-value
Affymetrix Detection Call p-value
VALUE
Normalized Signal
Data table
ID_REF
VZ17_Signal
VZ17_Detection
VZ17_Detection p-value
VALUE
AFFX-BioB-5_at
800.5
P
0.00006
709.8097465
AFFX-BioB-M_at
1356.7
P
0.000754
1202.996731
AFFX-BioB-3_at
857.9
P
0.000044
760.7067851
AFFX-BioC-5_at
2575.3
P
0.000044
2283.539088
AFFX-BioC-3_at
2696
P
0.000044
2390.564743
AFFX-BioDn-5_at
5071.4
P
0.000044
4496.850903
AFFX-BioDn-3_at
8839.8
P
0.000044
7838.321295
AFFX-CreX-5_at
27967.4
P
0.000052
24798.91706
AFFX-CreX-3_at
36409.7
P
0.000044
32284.77192
AFFX-DapX-5_at
856
P
0.00039
759.0220399
AFFX-DapX-M_at
1909.3
P
0.00039
1692.991566
AFFX-DapX-3_at
2384.4
P
0.000052
2114.266533
AFFX-LysX-5_at
108.8
P
0.001796
96.47382937
AFFX-LysX-M_at
200.3
P
0.030976
177.6076105
AFFX-LysX-3_at
328.9
P
0.000509
291.6382581
AFFX-PheX-5_at
147.5
P
0.00006
130.7894286
AFFX-PheX-M_at
141.8
P
0.004012
125.7351931
AFFX-PheX-3_at
310.8
P
0.006871
275.5888435
AFFX-ThrX-5_at
294.5
P
0.00039
261.1355032
AFFX-ThrX-M_at
315.1
P
0.000044
279.4016878
Total number of rows:
45101
Table truncated, full table size
1736 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM157862.cel.gz
5.7 Mb
(ftp)
(http)
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