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Sample GSM158134 Query DataSets for GSM158134
Status Public on Apr 23, 2007
Title BALB-RAG_OVA Replicate 1
Sample type RNA
 
Source name mouse whole lung
Organism Mus musculus
Characteristics 8 wk old BALB/c (or BALB-RAG) mice were sensitized to ovalbumin (or PBS)]on days 1 and 7, and challenged with aerosolized ovalbumin (or PBS) on days 15-21, and samples harvested on day 22
Extracted molecule total RNA
Extraction protocol RNA was isolated using TRIZOL reagent (Gibco-BRL Life Technologies) according to the manufacturers protocol
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on rat RAE-230A microrray gene chips. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
Description gene expression from allergen stimulated mouse lung
Data processing GCRMA
 
Submission date Jan 24, 2007
Last update date Aug 28, 2018
Contact name Xin Lu
E-mail(s) xin.x.lu@abbott.com
Phone 847-937-7942
Organization name Abbott Laboratories
Department Cancer Research
Lab Cancer Genomics
Street address 100 Abbott Park Rd
City Abbott Park
State/province IL
ZIP/Postal code 60064
Country USA
 
Platform ID GPL1261
Series (1)
GSE6858 Expression data from experimental murine asthma
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF Affymetrix Probe_set ID
VALUE expression levels

Data table
ID_REF VALUE
AFFX-BioB-5_at 324.7914066
AFFX-BioB-M_at 530.6761962
AFFX-BioB-3_at 1224.066988
AFFX-BioC-5_at 104.8621235
AFFX-BioC-3_at 243.4909333
AFFX-BioDn-5_at 144.5107854
AFFX-BioDn-3_at 716.7791596
AFFX-CreX-5_at 245.8926515
AFFX-CreX-3_at 534.1104281
AFFX-DapX-5_at 964.8577409
AFFX-DapX-M_at 201.3389575
AFFX-DapX-3_at 216.0503071
AFFX-LysX-5_at 129.212886
AFFX-LysX-M_at 506.4307156
AFFX-LysX-3_at 220.2042906
AFFX-PheX-5_at 114.9239964
AFFX-PheX-M_at 556.2489903
AFFX-PheX-3_at 2420.863636
AFFX-ThrX-5_at 645.4407258
AFFX-ThrX-M_at 112.1082375

Total number of rows: 45101

Table truncated, full table size 1026 Kbytes.




Supplementary file Size Download File type/resource
GSM158134.cel.gz 5.8 Mb (ftp)(http) CEL

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