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Sample GSM158141 Query DataSets for GSM158141
Status Public on Apr 23, 2007
Title BALB-RAG_PBS Replicate 4
Sample type RNA
 
Source name mouse whole lung
Organism Mus musculus
Characteristics 8 wk old BALB/c (or BALB-RAG) mice were sensitized to ovalbumin (or PBS)]on days 1 and 7, and challenged with aerosolized ovalbumin (or PBS) on days 15-21, and samples harvested on day 22
Extracted molecule total RNA
Extraction protocol RNA was isolated using TRIZOL reagent (Gibco-BRL Life Technologies) according to the manufacturers protocol
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on rat RAE-230A microrray gene chips. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
Description gene expression from allergen stimulated mouse lung
Data processing GCRMA
 
Submission date Jan 24, 2007
Last update date Aug 28, 2018
Contact name Xin Lu
E-mail(s) xin.x.lu@abbott.com
Phone 847-937-7942
Organization name Abbott Laboratories
Department Cancer Research
Lab Cancer Genomics
Street address 100 Abbott Park Rd
City Abbott Park
State/province IL
ZIP/Postal code 60064
Country USA
 
Platform ID GPL1261
Series (1)
GSE6858 Expression data from experimental murine asthma
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF Affymetrix Probe_set ID
VALUE expression levels

Data table
ID_REF VALUE
AFFX-BioB-5_at 453.7691787
AFFX-BioB-M_at 479.1697725
AFFX-BioB-3_at 1061.060817
AFFX-BioC-5_at 88.11282869
AFFX-BioC-3_at 124.5425817
AFFX-BioDn-5_at 110.9467132
AFFX-BioDn-3_at 507.7590131
AFFX-CreX-5_at 252.1835593
AFFX-CreX-3_at 537.1045787
AFFX-DapX-5_at 454.3738735
AFFX-DapX-M_at 274.7978945
AFFX-DapX-3_at 129.3282539
AFFX-LysX-5_at 160.1134224
AFFX-LysX-M_at 577.6229618
AFFX-LysX-3_at 240.3532525
AFFX-PheX-5_at 163.0173502
AFFX-PheX-M_at 657.8035532
AFFX-PheX-3_at 2893.08932
AFFX-ThrX-5_at 745.1008114
AFFX-ThrX-M_at 109.794417

Total number of rows: 45101

Table truncated, full table size 1026 Kbytes.




Supplementary file Size Download File type/resource
GSM158141.cel.gz 6.1 Mb (ftp)(http) CEL

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