GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM158193
Query DataSets for GSM158193
Status
Public on Nov 23, 2007
Title
HB06bis
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
pCR - pathological complete response
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
Standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 161 tumours
Data processing
RMA
Submission date
Jan 25, 2007
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
Mauro.Delorenzi@unil.ch
Organization name
ISREC
Street address
155 Boveresses
City
Lausanne
ZIP/Postal code
1066
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE6861
Prediction of breast cancer pathological complete response to anthracycline/taxane chemotherapy.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
8.9750050617831
117_3p_at
7.92020396018057
1494_3p_f_at
7.40159215296251
1552275_3p_s_at
8.18330372518249
1552281_3p_at
9.16877742559818
1552296_3p_at
6.1780038333882
1552302_3p_at
6.0548545660849
1552311_3p_a_at
8.4960856131043
1552321_3p_a_at
5.11919845653187
1552340_3p_at
6.70287673347776
1552343_3p_s_at
7.04197805345686
1552354_3p_at
7.55488699217017
1552476_3p_s_at
8.2012884073112
1552480_3p_s_at
4.13747567684623
1552504_3p_a_at
7.87911645527816
1552518_3p_s_at
5.78489509816035
1552528_3p_at
8.38111981729215
1552535_3p_at
7.78591350515324
1552566_3p_at
6.68412084536846
1552575_3p_a_at
9.94677138671639
Total number of rows:
61359
Table truncated, full table size
2189 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM158193.CEL.gz
8.5 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
