GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM158230
Query DataSets for GSM158230
Status
Public on Nov 23, 2007
Title
HB43bis
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
pCR - pathological complete response
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
Standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 161 tumours
Data processing
RMA
Submission date
Jan 25, 2007
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
Mauro.Delorenzi@unil.ch
Organization name
ISREC
Street address
155 Boveresses
City
Lausanne
ZIP/Postal code
1066
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE6861
Prediction of breast cancer pathological complete response to anthracycline/taxane chemotherapy.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
8.71927741286225
117_3p_at
8.13301193452802
1494_3p_f_at
7.45788885701546
1552275_3p_s_at
7.83607480989689
1552281_3p_at
9.44499017189126
1552296_3p_at
6.06667732937891
1552302_3p_at
5.6513729130733
1552311_3p_a_at
8.31028577278995
1552321_3p_a_at
5.0993947705448
1552340_3p_at
6.73182262358084
1552343_3p_s_at
7.1923989456588
1552354_3p_at
8.01936091506183
1552476_3p_s_at
8.54161670815016
1552480_3p_s_at
3.77120158672363
1552504_3p_a_at
7.8964660897598
1552518_3p_s_at
5.56839480827133
1552528_3p_at
8.2861934422873
1552535_3p_at
7.98459570901248
1552566_3p_at
6.86989876139186
1552575_3p_a_at
7.5268046245878
Total number of rows:
61359
Table truncated, full table size
2189 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM158230.CEL.gz
8.8 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
