GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM158238
Query DataSets for GSM158238
Status
Public on Nov 23, 2007
Title
HB51bis
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
npCR - no pathological complete response
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
Standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 161 tumours
Data processing
RMA
Submission date
Jan 25, 2007
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
Mauro.Delorenzi@unil.ch
Organization name
ISREC
Street address
155 Boveresses
City
Lausanne
ZIP/Postal code
1066
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE6861
Prediction of breast cancer pathological complete response to anthracycline/taxane chemotherapy.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
8.70954306282212
117_3p_at
8.26459575277881
1494_3p_f_at
7.47393320773864
1552275_3p_s_at
7.82665124672433
1552281_3p_at
9.34979207474383
1552296_3p_at
6.18883943781634
1552302_3p_at
6.35595501942216
1552311_3p_a_at
8.40414285152598
1552321_3p_a_at
5.21226226839584
1552340_3p_at
6.42444974273239
1552343_3p_s_at
7.42112217467023
1552354_3p_at
7.84779348651491
1552476_3p_s_at
8.08412804199764
1552480_3p_s_at
4.01246008483382
1552504_3p_a_at
7.63782444427521
1552518_3p_s_at
5.29853139642934
1552528_3p_at
8.17368091875958
1552535_3p_at
7.84551810047213
1552566_3p_at
6.50384218599875
1552575_3p_a_at
8.03119753657555
Total number of rows:
61359
Table truncated, full table size
2190 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM158238.CEL.gz
8.7 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
