GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM158312
Query DataSets for GSM158312
Status
Public on Nov 23, 2007
Title
HB125
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
pCR - pathological complete response
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
Standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 161 tumours
Data processing
RMA
Submission date
Jan 25, 2007
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
Mauro.Delorenzi@unil.ch
Organization name
ISREC
Street address
155 Boveresses
City
Lausanne
ZIP/Postal code
1066
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE6861
Prediction of breast cancer pathological complete response to anthracycline/taxane chemotherapy.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
9.324283356764
117_3p_at
7.60686165198494
1494_3p_f_at
7.29420914542248
1552275_3p_s_at
7.86219981741581
1552281_3p_at
9.46128962524285
1552296_3p_at
5.97591819043064
1552302_3p_at
5.88289605735509
1552311_3p_a_at
8.27619666009277
1552321_3p_a_at
5.27368721833942
1552340_3p_at
6.54921838840019
1552343_3p_s_at
7.10770917286354
1552354_3p_at
8.02128852136579
1552476_3p_s_at
7.92457415565275
1552480_3p_s_at
4.1768799626888
1552504_3p_a_at
7.45677167563345
1552518_3p_s_at
5.635668842204
1552528_3p_at
8.12701128585335
1552535_3p_at
7.69617264618948
1552566_3p_at
6.81295918264964
1552575_3p_a_at
8.06701512694826
Total number of rows:
61359
Table truncated, full table size
2190 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM158312.CEL.gz
8.9 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
