GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM158335
Query DataSets for GSM158335
Status
Public on Nov 23, 2007
Title
HB150
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
npCR - no pathological complete response
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
Standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 161 tumours
Data processing
RMA
Submission date
Jan 25, 2007
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
Mauro.Delorenzi@unil.ch
Organization name
ISREC
Street address
155 Boveresses
City
Lausanne
ZIP/Postal code
1066
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE6861
Prediction of breast cancer pathological complete response to anthracycline/taxane chemotherapy.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
9.13890945535403
117_3p_at
7.94160929154948
1494_3p_f_at
7.09308385659489
1552275_3p_s_at
7.80560898523775
1552281_3p_at
9.32585642412732
1552296_3p_at
6.08771205012027
1552302_3p_at
5.7866585907867
1552311_3p_a_at
8.25563112209302
1552321_3p_a_at
4.66715002475148
1552340_3p_at
6.52885713929176
1552343_3p_s_at
6.92853125617886
1552354_3p_at
7.76823546047963
1552476_3p_s_at
7.8835210641008
1552480_3p_s_at
4.00691146912029
1552504_3p_a_at
7.5478552060653
1552518_3p_s_at
5.68376401952557
1552528_3p_at
8.29718289793103
1552535_3p_at
7.75510691638739
1552566_3p_at
6.77287972788577
1552575_3p_a_at
7.65771314137509
Total number of rows:
61359
Table truncated, full table size
2189 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM158335.CEL.gz
8.9 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
