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Sample GSM162066 Query DataSets for GSM162066
Status Public on Jun 06, 2007
Title 0.25 microgram total RNA from EPC derived microvescicles s6
Sample type RNA
 
Source name S6, particle RNA: 0.25 microgram
Organism Homo sapiens
Characteristics Microvescicles from human endothelial progenitor cells.
Biomaterial provider Benedetta Bussolati, Dept. of Internal Medicine, c.so Dogliotti 14, 10126 Torino (Italy)
Treatment protocol Microvescicles purified as Ratajczak et al. Leukemia 2006, 20:847
Growth protocol Cells are grown as described in Biancone et al. J. Immunol. 2004, 173:5268
Extracted molecule total RNA
Extraction protocol Trizol reagent, as described by manufacturer
Label Biotin
Label protocol IVT labelling, Illumina® TotalPrep™ RNA Amplification Kit Ambion
 
Hybridization protocol Standard protocol suggested from Illumina
Scan protocol Standard protocol suggested from Illumina
Description None
Data processing Average intensities were obtained by BeadStudio 1.5.1.3 with out normalization and background subtraction. Subsequently data were normalized by cyclic loess as described in Bolstad et al. Bioinformatics 2003, 19:185
 
Submission date Feb 13, 2007
Last update date Jun 06, 2007
Contact name Raffaele A Calogero
E-mail(s) raffaele.calogero@unito.it
Phone ++39 0116706454
Organization name University of Torino
Department Molecular Biotechnology Center
Lab Bioinformatics and Genomics Unit
Street address Via Nizza 52
City Torino
State/province To
ZIP/Postal code 10126
Country Italy
 
Platform ID GPL2507
Series (1)
GSE7019 Total RNA from EPC derived microvescicles

Data table header descriptions
ID_REF
VALUE cyclic loess

Data table
ID_REF VALUE
GI_10047089-S 7.241102346
GI_10047091-S 7.537818493
GI_10047093-S 7.050006146
GI_10047099-S 7.27391781
GI_10047103-S 7.411458328
GI_10047105-S 7.017999872
GI_10047121-S 7.402646382
GI_10047123-S 7.362448901
GI_10047133-A 7.152424993
GI_10047133-I 7.595821154
GI_10092578-S 7.250044854
GI_10092585-S 7.408886939
GI_10092596-S 7.312875042
GI_10092600-S 7.240642783
GI_10092602-S 7.265556105
GI_10092603-S 7.414234065
GI_10092611-A 7.469281095
GI_10092616-S 7.533461114
GI_10092618-S 6.961684918
GI_10092638-S 7.297718772

Total number of rows: 47293

Table truncated, full table size 1140 Kbytes.




Supplementary file Size Download File type/resource
GSM162066.txt.gz 575.2 Kb (ftp)(http) TXT

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