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Sample GSM16635 Query DataSets for GSM16635
Status Public on Oct 26, 2004
Title P810 cerebellum #2
Sample type SAGE
Anchor NlaIII
Tag Count 8507
Tag Length 10
 
Source name P810 C57BL6/J male mouse cerebellum
Organism Mus musculus
Extracted molecule total RNA
 
Description C57BL6/J male mouse was sacrificed and the cerebellum was quickly removed. Total RNA was isolated using Trizol. For the creation of the library, 40 micrograms of total RNA was used. cDNA was synthesized on oligo dT beads.
Enzyme: NlaIII
Vector: pZERO-1
 
Submission date Feb 06, 2004
Last update date Nov 19, 2008
Contact name Magdalena Popesco
E-mail(s) mpopesco@hotmail.com
Phone 614-292-7747
Organization name The Ohio State Universiy
Street address
City Columbus
State/province OH
ZIP/Postal code 43210
Country USA
 
Platform ID GPL11
Series (1)
GSE1090 Mouse cerebellum

Data table header descriptions
TAG
COUNT
TPM tags per million

Data table
TAG COUNT TPM
ATAATACATA 319 37498.53
ATACTGACAT 140 16457.04
GCTGCCCTCC 139 16339.49
AAAAAAAAAA 67 7875.87
GTGGCTCACA 41 4819.56
ACCAATGAAC 34 3996.71
AGCAGTCCCC 28 3291.41
TCAGGCTGCC 26 3056.31
GTAAGCATAA 25 2938.76
AGGACAAATA 24 2821.21
ATGACTGATA 22 2586.11
AAAAATCATC 21 2468.56
TAGATATAGG 21 2468.56
GAAGCAGGAC 20 2351.01
GAATAATAAA 20 2351.01
CAAACCTCCA 19 2233.45
CTAATAAAAG 19 2233.45
CTGAGGAAGT 19 2233.45
TGGGTTGTCT 19 2233.45
AGCAATTCAA 18 2115.90

Total number of rows: 4987

Table truncated, full table size 97 Kbytes.




Supplementary data files not provided
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