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Sample GSM1681 Query DataSets for GSM1681
Status Public on Jul 25, 2002
Title Adult mouse heart
Sample type SAGE
Anchor NlaIII
Tag Count 84192
Tag Length 10
 
Source name Hearts, 3-month old female C57BL/6 mice
Organism Mus musculus
Extracted molecule total RNA
 
Description A quantitative and validated SAGE transcriptome reference for adult mouse heart.
Adult mouse heart, 3-month old female C57BL/6 mice. Total number of 88,860 SAGE tags sequenced. 84,192 SAGE tags analyzed after clean-up (extraction of poly(A) tags, linker-generated tags, and tags originated from clones producing 4 tags or less).
Keywords = mouse, heart
 
Submission date May 23, 2002
Last update date Nov 19, 2008
Contact name Kenneth R. Boheler
E-mail(s) bohelerk@grc.nia.nih.gov
Phone 410-558-8189
Fax 410-558-8150
URL http://www.grc.nia.nih.gov/branches/lcs/mcu.htm
Organization name National Institute on Aging, NIH
Department GRC
Lab Laboratory of Cardiovascular Science
Street address 5600 Nathan Shock Drive
City Baltimore
State/province MD
ZIP/Postal code 21224
Country USA
 
Platform ID GPL11
Series (1)
GSE25749 SAGE libraries from mouse

Data table header descriptions
TAG Adult mouse heart
COUNT Cleaned-up
TPM tags per million

Data table
TAG COUNT TPM
AAAAAAAAAC 2 23.76
AAAAAAAAAG 6 71.27
AAAAAAAAAT 5 59.39
AAAAAAACAT 1 11.88
AAAAAAAGCG 1 11.88
AAAAAAATAA 1 11.88
AAAAAAATAG 4 47.51
AAAAAACAAT 1 11.88
AAAAAACATC 1 11.88
AAAAAAGAAA 2 23.76
AAAAAAGACT 1 11.88
AAAAAAGTAC 1 11.88
AAAAAAGTTG 1 11.88
AAAAAATAAT 1 11.88
AAAAAATCAC 1 11.88
AAAAAATCAT 27 320.70
AAAAAATCGT 1 11.88
AAAAACAATC 1 11.88
AAAAACAGTG 5 59.39
AAAAACATCT 1 11.88

Total number of rows: 23941

Table truncated, full table size 446 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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