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Sample GSM169456 Query DataSets for GSM169456
Status Public on Apr 20, 2007
Title ESC_Zfx-flox_Replicate2
Sample type RNA
 
Source name ESC Cultured in 15% KO + LIF without feeders
Organism Mus musculus
Characteristics Zfx-flox TC1 ESC
Cultured in 15% KO + LIF without feeders
Extracted molecule total RNA
Extraction protocol QIAGEN RNeasy protocol
Label Biotin
Label protocol Ambion MessageAmp II aRNA protocol
Single-round amplification and labeling
 
Hybridization protocol Hybridization performed on a Affymetrix FS450/250 Fluidics Station using the FS450_0002 script.
Scan protocol Array scanning and raw data processing were done using
GCOS 1.4 software (Affymetrix)
Description Murine Zfx-flox ESC Replicate2
Data processing Array scanning and raw data processing were done using
GCOS 1.4 software (Affymetrix)
 
Submission date Feb 19, 2007
Last update date Aug 28, 2018
Contact name Jose M Galan
Organization name Columbia University Medical Center
Street address 701 W 168th St Room 609
City New York
State/province NY
ZIP/Postal code 10032
Country USA
 
Platform ID GPL1261
Series (1)
GSE7069 Zfx controls the self-renewal of embryonic and hematopoietic stem cells
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE VALUE
ABS_CALL ABS_CALL
DETECTION P-VALUE DETECTION-P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 250.7 P 0.000224668
AFFX-BioB-M_at 385.414 P 5.16732e-05
AFFX-BioB-3_at 181.35 P 4.42873e-05
AFFX-BioC-5_at 813.802 P 7.00668e-05
AFFX-BioC-3_at 680.97 P 4.42873e-05
AFFX-BioDn-5_at 1333.45 P 4.42873e-05
AFFX-BioDn-3_at 3085.42 P 8.14279e-05
AFFX-CreX-5_at 7557.87 P 5.16732e-05
AFFX-CreX-3_at 8264.45 P 4.42873e-05
AFFX-DapX-5_at 328.474 P 7.00668e-05
AFFX-DapX-M_at 662.482 P 0.000224668
AFFX-DapX-3_at 587.777 P 8.14279e-05
AFFX-LysX-5_at 38.8502 P 0.000126798
AFFX-LysX-M_at 101.653 P 0.00401721
AFFX-LysX-3_at 131.799 P 5.16732e-05
AFFX-PheX-5_at 71.1478 P 0.00227496
AFFX-PheX-M_at 73.8837 P 0.00110197
AFFX-PheX-3_at 74.9249 P 0.000445901
AFFX-ThrX-5_at 70.9768 P 0.000445901
AFFX-ThrX-M_at 114.952 P 0.000224668

Total number of rows: 45101

Table truncated, full table size 1381 Kbytes.




Supplementary file Size Download File type/resource
GSM169456.CEL.gz 3.9 Mb (ftp)(http) CEL
GSM169456.CHP.gz 242.9 Kb (ftp)(http) CHP
Processed data provided as supplementary file

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