|
Status |
Public on May 29, 2015 |
Title |
IL7_Del_rep1 |
Sample type |
RNA |
|
|
Source name |
Setdb1 Δ/Δ pro-B cell, cultured in IL-7
|
Organism |
Mus musculus |
Characteristics |
cell type: pro-B cell tissue: cultured in IL-7 bcl2 transgene: bcl-2 transgenic setdb1: Deleted
|
Growth protocol |
Murine bone marrow-derived pro-B cells were isolated and purified by FACS. Cells were then clutured for four days in media containing 5 ng/µl of IL-7 (Invitrogen, PMC0075).
|
Extracted molecule |
total RNA |
Extraction protocol |
RNA was purified using Qiagen Rneasy kits according to the manufacturer's instructions.
|
Label |
biotin
|
Label protocol |
Purified RNA was amplified using Nugen Ovation kits and labeled using Nugen Encore Biotin Kit.
|
|
|
Hybridization protocol |
Products were hybridized to Affymetrix Mouse Gene 1.0 Array according to the manufacturer's instructions.
|
Scan protocol |
GS3000
|
Data processing |
Gene expression levels were determined using the Affymetrix Expression Console software (v1.2.0.20) with exon-level RMA analysis and default settings.
|
|
|
Submission date |
May 29, 2015 |
Last update date |
May 29, 2015 |
Contact name |
Patrick Collins |
E-mail(s) |
patlennycollins@yahoo.com
|
Organization name |
Washington University
|
Department |
Pathology and Immunology
|
Lab |
Oltz
|
Street address |
1217 Oakleaf dr
|
City |
Saint Louis |
State/province |
MO |
ZIP/Postal code |
63119 |
Country |
USA |
|
|
Platform ID |
GPL10740 |
Series (2) |
GSE69378 |
SETDB1 Represses Endogenous and Exogenous Retroviruses in B Lymphocytes [array] |
GSE69504 |
SETDB1 Represses Endogenous and Exogenous Retroviruses in B Lymphocytes |
|