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Sample GSM17048 Query DataSets for GSM17048
Status Public on Apr 01, 2004
Title WTK1 Ar 24h:WTK1 U
Sample type RNA
 
Channel 1
Source name WTK1 Ar 24h
Organism Homo sapiens
Extracted molecule total RNA
 
Channel 2
Source name WTK1 U
Organism Homo sapiens
Extracted molecule total RNA
 
 
Description mAdb experiment ID: 32902
WTK1 cells treated with argon and harvested 24 hours after the end of treatment versus untreated WTK1 cells.
Array Print: Hs-UniGEM2-v4.0p6-052402
cell_type: lymphoblastoid
cell_line: WTK1
p53 allele: mutant M237I
treatment_agent: argon
treatment_dose: vehicle
treatment_time: 24 hours
 
Submission date Feb 18, 2004
Last update date May 28, 2005
Contact name Ana I Robles
E-mail(s) Ana_Robles@nih.gov
Phone 301-496-1729
Organization name National Cancer Institute/NIH
Lab Laboratory of Human Carcinogenesis
Street address 37 Convent Dr 37/3060D
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platform ID GPL257
Series (1)
GSE1064 TK6 and WTK1 LCLs plus NO

Data table header descriptions
ID_REF NCI mAdb well id
VALUE log ratio (log2 of PRE_VALUE)
Slide_block Array block location
Slide_column Array column location
Slide_row Array row location
CH1_MEAN Sample 1 (Red Channel) Mean Intensity
CH1_SD Sample 1 (Red Channel) Standard Deviation
CH1_BKD_Median Sample 1 (Red Channel) Median Background Level
CH1_BKD_SD Sample 1 (Red Channel) Background Standard Deviation
CH2_MEAN Sample 2 (Green Channel) Mean Intensity
CH2_SD Sample 2 Green Channel) Standard Deviation
CH2_BKD_Median Sample 2 Green Channel) Median Background Level
CH2_BKD_SD Sample 2 Green Channel) Background Standard Deviation
Flag Quality flag 0->good, -50->Not found, -100->Bad
PRE_VALUE Calibrated Ratio (Sample_target_source1 / Sample_target_source2 )

Data table
ID_REF VALUE Slide_block Slide_column Slide_row CH1_MEAN CH1_SD CH1_BKD_Median CH1_BKD_SD CH2_MEAN CH2_SD CH2_BKD_Median CH2_BKD_SD Flag PRE_VALUE
159762 0.3311323 1 1 1 874 243 457 159 642 153 298 101 0 1.258
159763 0.0454433 2 1 1 1463 408 447 146 1328 301 307 101 0 1.032
159764 0.0057593 3 1 1 1746 513 462 236 1614 517 287 137 0 1.004
159765 0.1056783 4 1 1 5887 1821 479 175 5487 1873 271 133 0 1.076
159766 -0.0101343 1 2 1 1599 436 450 158 1502 473 302 119 0 0.993
159767 0.0384363 2 2 1 836 294 446 154 690 200 296 197 0 1.027
159768 -0.2226333 3 2 1 934 291 487 176 830 234 289 192 0 0.857
159769 0.3126653 4 2 1 1765 446 458 173 1363 388 271 144 0 1.242
159770 0.1814213 1 3 1 1068 316 444 181 873 203 302 97 0 1.134
159771 0.1902993 2 3 1 1095 287 445 166 879 248 288 106 0 1.141
159772 0.0635033 3 3 1 876 272 458 168 694 218 279 102 0 1.045
159773 0.3906683 4 3 1 1002 354 470 168 697 324 276 222 0 1.311
159774 -0.0028883 1 4 1 1788 442 460 178 1690 387 310 121 0 0.998
159775 -0.0484123 2 4 1 850 296 438 143 735 202 293 139 0 0.967
159776 -0.0846703 3 4 1 924 301 452 152 802 251 283 110 0 0.943
159777 0.3184613 4 4 1 808 305 457 173 561 198 269 150 0 1.247
159778 0.1775993 1 5 1 927 293 429 164 764 148 307 177 0 1.131
159779 -0.0938793 2 5 1 711 210 460 200 579 158 301 129 0 0.937
159780 0.2116353 3 5 1 866 268 462 171 648 240 286 137 0 1.158
159781 0.6276073 4 5 1 1092 347 462 158 692 275 269 235 0 1.545

Total number of rows: 9128

Table truncated, full table size 594 Kbytes.




Supplementary data files not provided
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