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Sample GSM17049 Query DataSets for GSM17049
Status Public on Apr 01, 2004
Title TK6 NO 24h:TK6 U, rep 2
Sample type RNA
 
Channel 1
Source name TK6 NO 24h
Organism Homo sapiens
Extracted molecule total RNA
 
Channel 2
Source name TK6 U
Organism Homo sapiens
Extracted molecule total RNA
 
 
Description mAdb experiment ID: 33793
TK6 cells treated with 390 micromol nitric oxide and harvested 24 hours after the end of treatment versus untreated TK6 cells.
Array Print: Hs-UniGEM2-v4.0p6-052402
cell_type: lymphoblastoid
cell_line: TK6
p53 allele: wild-type
treatment_agent: nitric oxide
treatment_dose: 390 micromol
treatment_time: 24 hours
 
Submission date Feb 18, 2004
Last update date May 28, 2005
Contact name Ana I Robles
E-mail(s) Ana_Robles@nih.gov
Phone 301-496-1729
Organization name National Cancer Institute/NIH
Lab Laboratory of Human Carcinogenesis
Street address 37 Convent Dr 37/3060D
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platform ID GPL257
Series (1)
GSE1064 TK6 and WTK1 LCLs plus NO

Data table header descriptions
ID_REF NCI mAdb well id
VALUE log ratio (log2 of PRE_VALUE)
Slide_block Array block location
Slide_column Array column location
Slide_row Array row location
CH1_MEAN Sample 1 (Red Channel) Mean Intensity
CH1_SD Sample 1 (Red Channel) Standard Deviation
CH1_BKD_Median Sample 1 (Red Channel) Median Background Level
CH1_BKD_SD Sample 1 (Red Channel) Background Standard Deviation
CH2_MEAN Sample 2 (Green Channel) Mean Intensity
CH2_SD Sample 2 Green Channel) Standard Deviation
CH2_BKD_Median Sample 2 Green Channel) Median Background Level
CH2_BKD_SD Sample 2 Green Channel) Background Standard Deviation
Flag Quality flag 0->good, -50->Not found, -100->Bad
PRE_VALUE Calibrated Ratio (Sample_target_source1 / Sample_target_source2 )

Data table
ID_REF VALUE Slide_block Slide_column Slide_row CH1_MEAN CH1_SD CH1_BKD_Median CH1_BKD_SD CH2_MEAN CH2_SD CH2_BKD_Median CH2_BKD_SD Flag PRE_VALUE
159762 0.0285693 1 1 1 1547 512 630 195 1584 416 725 178 0 1.020
159763 -0.0380063 2 1 1 1920 453 630 181 1963 408 698 121 0 0.974
159764 0.2412303 3 1 1 3548 1063 635 163 2997 899 643 102 0 1.182
159765 0.5801453 4 1 1 6946 2081 647 192 4631 1496 606 176 0 1.495
159766 -0.1536073 1 2 1 2911 868 633 185 3127 742 707 121 0 0.899
159767 0.0157833 2 2 1 1670 548 655 207 1665 522 706 150 0 1.011
159768 0.2289733 3 2 1 2375 1020 627 171 2066 884 641 107 0 1.172
159769 0.5469563 4 2 1 3555 1395 658 204 2501 861 607 138 0 1.461
159770 -0.0528953 1 3 1 1868 599 643 188 1926 443 712 124 0 0.964
159771 -0.1488013 2 3 1 1908 641 647 197 2024 642 688 131 0 0.902
159772 0.3056793 3 3 1 2025 526 638 183 1713 374 641 115 0 1.236
159773 0.2424503 4 3 1 1213 518 656 238 1062 392 612 181 0 1.183
159774 -0.1762513 1 4 1 3554 857 647 194 3854 912 717 143 0 0.885
159775 0.0989583 2 4 1 1417 366 647 181 1396 439 709 110 0 1.071
159776 0.3729523 3 4 1 1774 530 641 183 1483 392 647 105 0 1.295
159777 0.0468403 4 4 1 1556 514 643 182 1440 556 596 101 0 1.033
159778 0.0313953 1 5 1 2016 398 650 184 1983 408 706 137 0 1.022
159779 0.2215683 2 5 1 1840 482 640 178 1684 416 701 135 0 1.166
159780 0.0510243 3 5 1 1639 537 638 188 1561 487 638 123 0 1.036
159781 0.3379963 4 5 1 1566 602 645 185 1295 488 599 103 0 1.264

Total number of rows: 9128

Table truncated, full table size 609 Kbytes.




Supplementary data files not provided
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