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Sample GSM17056 Query DataSets for GSM17056
Status Public on Apr 01, 2004
Title TK6 NO 12h:TK6 U, rep 2
Sample type RNA
 
Channel 1
Source name TK6 NO 12h
Organism Homo sapiens
Extracted molecule total RNA
 
Channel 2
Source name TK6 U
Organism Homo sapiens
Extracted molecule total RNA
 
 
Description mAdb experiment ID: 42336
TK6 cells treated with 390 micromol nitric oxide and harvested 12 hours after the end of treatment versus untreated TK6 cells.
Array Print: Hs-UniGEM2-v5.0p16-112502
cell_type: lymphoblastoid
cell_line: TK6
p53 allele: wild-type
treatment_agent: nitric oxide
treatment_dose: 390 micromol
treatment_time: 12 hours
 
Submission date Feb 18, 2004
Last update date May 28, 2005
Contact name Ana I Robles
E-mail(s) Ana_Robles@nih.gov
Phone 301-496-1729
Organization name National Cancer Institute/NIH
Lab Laboratory of Human Carcinogenesis
Street address 37 Convent Dr 37/3060D
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platform ID GPL257
Series (1)
GSE1064 TK6 and WTK1 LCLs plus NO

Data table header descriptions
ID_REF NCI mAdb well id
VALUE log ratio (log2 of PRE_VALUE)
Slide_block Array block location
Slide_column Array column location
Slide_row Array row location
CH1_MEAN Sample 1 (Red Channel) Mean Intensity
CH1_SD Sample 1 (Red Channel) Standard Deviation
CH1_BKD_Median Sample 1 (Red Channel) Median Background Level
CH1_BKD_SD Sample 1 (Red Channel) Background Standard Deviation
CH2_MEAN Sample 2 (Green Channel) Mean Intensity
CH2_SD Sample 2 Green Channel) Standard Deviation
CH2_BKD_Median Sample 2 Green Channel) Median Background Level
CH2_BKD_SD Sample 2 Green Channel) Background Standard Deviation
Flag Quality flag 0->good, -50->Not found, -100->Bad
PRE_VALUE Calibrated Ratio (Sample_target_source1 / Sample_target_source2 )

Data table
ID_REF VALUE Slide_block Slide_column Slide_row CH1_MEAN CH1_SD CH1_BKD_Median CH1_BKD_SD CH2_MEAN CH2_SD CH2_BKD_Median CH2_BKD_SD Flag PRE_VALUE
159762 -1.3183263 1 1 1 653 201 159 53 2137 436 703 104 0 0.401
159763 0.2927823 2 1 1 1909 797 159 92 2322 936 658 358 0 1.225
159764 0.3459643 3 1 1 4949 2093 168 913 4980 1910 601 1167 0 1.271
159765 -0.4560093 4 1 1 3987 921 172 66 6664 1433 567 142 0 0.729
159766 -0.7661123 1 2 1 1645 614 174 78 3737 1119 825 202 0 0.588
159767 0.0854253 2 2 1 2288 470 159 109 2991 536 655 245 0 1.061
159768 -0.2142403 3 2 1 714 302 161 103 1342 597 595 129 0 0.862
159769 -0.0365263 4 2 1 2278 685 171 101 3085 817 570 140 0 0.975
159770 -1.0000003 1 3 1 502 314 183 99 1717 479 974 280 0 0.500
159771 -0.3677323 2 3 1 1891 486 159 72 3232 760 630 210 0 0.775
159772 0.0454433 3 3 1 1059 319 165 61 1595 439 586 114 0 1.032
159773 -0.4169623 4 3 1 726 225 168 75 1455 380 588 114 0 0.749
159774 -1.3808223 1 4 1 2793 1093 182 101 8844 3478 930 232 0 0.384
159775 -0.2705563 2 4 1 1957 394 167 85 3153 609 639 227 0 0.829
159776 0.8359243 3 4 1 2226 949 161 78 1933 617 586 122 0 1.785
159777 -0.4759363 4 4 1 556 153 177 73 1213 314 599 195 0 0.719
159778 -0.3529163 1 5 1 1033 301 183 79 2166 427 902 177 0 0.783
159779 -0.3827023 2 5 1 875 181 164 66 1700 263 620 160 0 0.767
159780 -0.3004483 3 5 1 773 216 175 69 1444 323 586 109 0 0.812
159781 -0.5187013 4 5 1 617 138 173 76 1300 340 559 99 0 0.698

Total number of rows: 9128

Table truncated, full table size 596 Kbytes.




Supplementary data files not provided
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