NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM172463 Query DataSets for GSM172463
Status Public on Jul 02, 2007
Title Developmental regulation of the transcriptome of chicken retinal pigment epithelium (E7, replicate 3)
Sample type RNA
 
Source name Retinal Pigment Epithelium
Organism Gallus gallus
Characteristics Isolated from chicken embryos on embryoinic day 7 (E7)
Extracted molecule total RNA
Extraction protocol RNeasy Protect kit (Qiagen)
Label biotin-UTP
Label protocol affymetrix 3'-amplification ivt
 
Hybridization protocol Affymetrix standard protocol
Scan protocol Affymetrix standard protocol
Description E7, replicate 3
Data processing signal value generated from global scaling
 
Submission date Feb 28, 2007
Last update date Jul 02, 2007
Contact name Lawrence J Rizzolo
E-mail(s) lawrence.rizzolo@yale.edu
Organization name Yale University
Department Dept of Surgery
Street address 333 Cedar St
City New Haven
State/province CT
ZIP/Postal code 06511
Country USA
 
Platform ID GPL3213
Series (1)
GSE7176 Develomental Time Course of the Retinal Pigment Epithelial Transcriptome

Data table header descriptions
ID_REF
VALUE Signal
ABS_CALL Detection
DETECTION P-VALUE Dection p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 463.302 P 0.000753643
AFFX-BioB-M_at 495.21 P 4.42873e-05
AFFX-BioB-3_at 384.027 P 0.00010954
AFFX-BioC-5_at 1399.68 P 4.42873e-05
AFFX-BioC-3_at 1484.36 P 4.42873e-05
AFFX-BioDn-5_at 3063.49 P 4.42873e-05
AFFX-BioDn-3_at 6246.65 P 8.14279e-05
AFFX-CreX-5_at 14086.9 P 5.16732e-05
AFFX-CreX-3_at 18373.1 P 4.42873e-05
AFFX-DapX-5_at 5.13717 A 0.749204
AFFX-DapX-M_at 10.9365 A 0.425962
AFFX-DapX-3_at 7.47243 A 0.891021
AFFX-LysX-5_at 33.4108 A 0.147939
AFFX-LysX-M_at 16.3736 A 0.883887
AFFX-LysX-3_at 23.4408 A 0.48511
AFFX-PheX-5_at 2.17369 A 0.966323
AFFX-PheX-M_at 4.66961 A 0.783476
AFFX-PheX-3_at 36.9051 A 0.440646
AFFX-ThrX-5_at 5.03113 A 0.988616
AFFX-ThrX-M_at 6.5573 A 0.737173

Total number of rows: 38535

Table truncated, full table size 1490 Kbytes.




Supplementary file Size Download File type/resource
GSM172463.CEL.gz 3.6 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap