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Sample GSM172472 Query DataSets for GSM172472
Status Public on Jul 02, 2007
Title Developmental regulation of the transcriptome of chicken retinal pigment epithelium (E18, replicate 2)
Sample type RNA
 
Source name Retinal Pigment Epithelium
Organism Gallus gallus
Characteristics Isolated from chicken embryos on embryoinic day 18 (E18)
Extracted molecule total RNA
Extraction protocol RNeasy Protect kit (Qiagen)
Label biotin-UTP
Label protocol affymetrix 3'-amplification ivt
 
Hybridization protocol Affymetrix standard protocol
Scan protocol Affymetrix standard protocol
Description E18, replicate 2
Data processing signal value generated from global scaling
 
Submission date Feb 28, 2007
Last update date Jul 02, 2007
Contact name Lawrence J Rizzolo
E-mail(s) lawrence.rizzolo@yale.edu
Organization name Yale University
Department Dept of Surgery
Street address 333 Cedar St
City New Haven
State/province CT
ZIP/Postal code 06511
Country USA
 
Platform ID GPL3213
Series (1)
GSE7176 Develomental Time Course of the Retinal Pigment Epithelial Transcriptome

Data table header descriptions
ID_REF
VALUE Signal
ABS_CALL Detection
DETECTION P-VALUE Detection p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 507.765 P 0.000856509
AFFX-BioB-M_at 814.689 P 4.42873e-05
AFFX-BioB-3_at 622.975 P 7.00668e-05
AFFX-BioC-5_at 1809.69 P 5.16732e-05
AFFX-BioC-3_at 1738.23 P 4.42873e-05
AFFX-BioDn-5_at 3800.86 P 4.42873e-05
AFFX-BioDn-3_at 8362.55 P 8.14279e-05
AFFX-CreX-5_at 20251.4 P 5.16732e-05
AFFX-CreX-3_at 25299.2 P 4.42873e-05
AFFX-DapX-5_at 7.07013 A 0.60308
AFFX-DapX-M_at 28.9193 A 0.52976
AFFX-DapX-3_at 97.1906 A 0.300606
AFFX-LysX-5_at 5.33608 A 0.916408
AFFX-LysX-M_at 14.17 A 0.957038
AFFX-LysX-3_at 83.9798 P 0.0309764
AFFX-PheX-5_at 4.98256 A 0.860518
AFFX-PheX-M_at 8.03176 A 0.937071
AFFX-PheX-3_at 20.6171 A 0.659339
AFFX-ThrX-5_at 12.1444 A 0.932322
AFFX-ThrX-M_at 5.03388 A 0.843268

Total number of rows: 38535

Table truncated, full table size 1484 Kbytes.




Supplementary file Size Download File type/resource
GSM172472.CEL.gz 3.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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