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Sample GSM172473 Query DataSets for GSM172473
Status Public on Jul 02, 2007
Title Developmental regulation of the transcriptome of chicken retinal pigment epithelium (E18, replicate 3)
Sample type RNA
 
Source name Retinal Pigment Epithelium
Organism Gallus gallus
Characteristics Isolated from chicken embryos on embryoinic day 18 (E18)
Extracted molecule total RNA
Extraction protocol RNeasy Protect kit (Qiagen)
Label biotin-UTP
Label protocol affymetrix 3'-amplification ivt
 
Hybridization protocol Affymetrix standard protocol
Scan protocol Affymetrix standard protocol
Description E18, replicate 3
Data processing signal value generated from global scaling
 
Submission date Feb 28, 2007
Last update date Jul 02, 2007
Contact name Lawrence J Rizzolo
E-mail(s) lawrence.rizzolo@yale.edu
Organization name Yale University
Department Dept of Surgery
Street address 333 Cedar St
City New Haven
State/province CT
ZIP/Postal code 06511
Country USA
 
Platform ID GPL3213
Series (1)
GSE7176 Develomental Time Course of the Retinal Pigment Epithelial Transcriptome

Data table header descriptions
ID_REF
VALUE Signal
ABS_CALL Detection
DETECTION P-VALUE Detection p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 640.889 P 0.000753643
AFFX-BioB-M_at 1003.84 P 4.42873e-05
AFFX-BioB-3_at 675.387 P 6.02111e-05
AFFX-BioC-5_at 1969.48 P 5.16732e-05
AFFX-BioC-3_at 2158.96 P 4.42873e-05
AFFX-BioDn-5_at 4682.39 P 4.42873e-05
AFFX-BioDn-3_at 9230.73 P 6.02111e-05
AFFX-CreX-5_at 22410.1 P 5.16732e-05
AFFX-CreX-3_at 27366.8 P 4.42873e-05
AFFX-DapX-5_at 46.2708 A 0.262827
AFFX-DapX-M_at 17.8763 A 0.814869
AFFX-DapX-3_at 61.3111 A 0.52976
AFFX-LysX-5_at 4.97214 A 0.921998
AFFX-LysX-M_at 21.0543 A 0.824672
AFFX-LysX-3_at 29.8962 A 0.39692
AFFX-PheX-5_at 5.28255 A 0.876428
AFFX-PheX-M_at 7.27338 A 0.963431
AFFX-PheX-3_at 33.4713 A 0.574038
AFFX-ThrX-5_at 18.3981 A 0.645547
AFFX-ThrX-M_at 5.43799 A 0.868639

Total number of rows: 38535

Table truncated, full table size 1484 Kbytes.




Supplementary file Size Download File type/resource
GSM172473.CEL.gz 3.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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