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Sample GSM173295 Query DataSets for GSM173295
Status Public on Mar 16, 2007
Title PBMC_S.aureus_MSSA_INF472
Sample type RNA
 
Source name PBMC_S. aureus
Organism Homo sapiens
Characteristics Age: 0.08y, when sample taken
Gender: M
Race: Caucasian
Illness: Skin/Soft Tissue Abscess
Treatment: Cefazolin
Pathogen: S. aureus, MSSA
Extracted molecule total RNA
Extraction protocol RNeasy mini
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridize 6-Sample Beadchip
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description The subject was infected with S. aureus, MSSA.
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Mar 06, 2007
Last update date Mar 16, 2007
Contact name Damien Chaussabel
E-mail(s) DChaussabel@benaroyaresearch.org
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL2507
Series (1)
GSE6269 Gene expression patterns in blood leukocytes discriminate patients with acute infections

Data table header descriptions
ID_REF
VALUE Normalized value from BeadStudio software
p-value p-value from BeadStudio

Data table
ID_REF VALUE p-value
GI_10047089-S -2.3 0.33619
GI_10047091-S 2.4 0.684904
GI_10047093-S 111.1 1
GI_10047099-S 3.1 0.736981
GI_10047103-S 795.3 1
GI_10047105-S 0 0.512854
GI_10047121-S -4.9 0.166777
GI_10047123-S 158.3 1
GI_10047133-A -4.6 0.182597
GI_10047133-I -0.2 0.49176
GI_10092578-S -4.5 0.187212
GI_10092585-S 27.2 0.997363
GI_10092596-S 67.1 1
GI_10092600-S 271.9 1
GI_10092602-S 3.5 0.75412
GI_10092603-S -0.5 0.469347
GI_10092611-A 242.6 1
GI_10092616-S 20 0.994067
GI_10092618-S 2449.7 1
GI_10092638-S 9.3 0.948583

Total number of rows: 47292

Table truncated, full table size 1167 Kbytes.




Supplementary file Size Download File type/resource
GSM173295.txt.gz 319.8 Kb (ftp)(http) TXT

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