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Sample GSM173315 Query DataSets for GSM173315
Status Public on Mar 16, 2007
Title PBMC_InfluenzaA_INF542
Sample type RNA
 
Source name PBMC_Influenza
Organism Homo sapiens
Characteristics Age: 0.04y, when sample taken
Gender: F
Race: Hispanic
Illness: Fever
Treatment: Ampicillin/Gentamicin
Pathogen: Influenza A
Extracted molecule total RNA
Extraction protocol RNeasy mini
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridize 6-Sample Beadchip
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description The subject was infected with Influenza A.
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Mar 06, 2007
Last update date Mar 16, 2007
Contact name Damien Chaussabel
E-mail(s) DChaussabel@benaroyaresearch.org
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL2507
Series (1)
GSE6269 Gene expression patterns in blood leukocytes discriminate patients with acute infections

Data table header descriptions
ID_REF
VALUE Normalized value from BeadStudio software
p-value p-value from BeadStudio

Data table
ID_REF VALUE p-value
GI_10047089-S -8.4 0.112063
GI_10047091-S 14.5 0.967699
GI_10047093-S 96.3 1
GI_10047099-S 4.5 0.738958
GI_10047103-S 547.2 1
GI_10047105-S 13.3 0.958471
GI_10047121-S -1.6 0.424522
GI_10047123-S 68 1
GI_10047133-A -8 0.125247
GI_10047133-I 12.5 0.95122
GI_10092578-S -5.6 0.211602
GI_10092585-S 34.3 1
GI_10092596-S 88.1 1
GI_10092600-S 84.6 1
GI_10092602-S -7.8 0.13118
GI_10092603-S 0 0.514173
GI_10092611-A 120.6 1
GI_10092616-S 7 0.843111
GI_10092618-S 3113.2 1
GI_10092638-S 1.8 0.61437

Total number of rows: 47292

Table truncated, full table size 1161 Kbytes.




Supplementary file Size Download File type/resource
GSM173315.txt.gz 319.9 Kb (ftp)(http) TXT

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