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Sample GSM17430 Query DataSets for GSM17430
Status Public on Oct 26, 2004
Title P92 Cerebellum
Sample type SAGE
Anchor NlaIII
Tag Count 16392
Tag Length 10
 
Source name P92 C57BL6/J male mouse cerebellum
Organism Mus musculus
Extracted molecule total RNA
 
Description C57BL6/J male mouse was sacrificed and the cerebellum was quickly removed. Total RNA was isolated using Trizol. For the creation of the library, 40 micrograms of total RNA was used. cDNA was synthesized on oligo dT beads.
Enzyme: NlaIII
Vector: pZER0-1
 
Submission date Mar 02, 2004
Last update date Nov 19, 2008
Contact name Magdalena Popesco
E-mail(s) mpopesco@hotmail.com
Phone 614-292-7747
Organization name The Ohio State Universiy
Street address
City Columbus
State/province OH
ZIP/Postal code 43210
Country USA
 
Platform ID GPL11
Series (1)
GSE1090 Mouse cerebellum

Data table header descriptions
TAG
COUNT
TPM tags per million

Data table
TAG COUNT TPM
ATAATACATA 474 28916.54
GCTGCCCTCC 374 22816.01
ATACTGACAT 234 14275.26
GTGGCTCACA 186 11347.00
ACCAATGAAC 104 6344.56
AGCAGTCCCC 78 4758.42
GCACAACTTG 76 4636.41
AAAAAAAAAA 73 4453.39
AAAAATCATC 71 4331.38
GCTTCGTCCA 54 3294.29
ATGACTGATA 53 3233.28
GTAAGCATAA 50 3050.27
GCTTTCTTAC 48 2928.26
GAAGCAGGAC 47 2867.25
CAAACCTCCA 46 2806.25
GGCTTCGGTC 45 2745.24
TCAGGCTGCC 43 2623.23
CTAGTCTTTG 39 2379.21
AAGTGTCGCC 37 2257.20
CTGCGGCTTC 36 2196.19

Total number of rows: 7142

Table truncated, full table size 135 Kbytes.




Supplementary data files not provided
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