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Sample GSM176484 Query DataSets for GSM176484
Status Public on Jun 04, 2007
Title embryo_at_day1.5_rep2
Sample type RNA
 
Source name Mouse preimplnatation embryos at day 1.5.
Organism Mus musculus
Characteristics Strain: ICR
Extracted molecule total RNA
Extraction protocol Total RNA was isolated by following the manual of ISOGEN (NIPPON GENE CO., LTD).
Label biotin
Label protocol Biotinylated cRNA were prepared according to the Affymetrix protocol (Two-Cycle Target Labeling Assays) from 0.1 ug total RNA.
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Mouse Genome 430 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using an Affymetrix GeneChip Scanner.
Description Gene expression data from embryos at day 1.5.
Data processing The data were analyzed with GCRMA algorithm
 
Submission date Mar 19, 2007
Last update date Aug 28, 2018
Contact name Eisuke Nishida
E-mail(s) nishida@lif.kyoto-u.ac.jp
Phone +81-75-753-4230
Organization name Graduate School of Biostudies, Kyoto University
Department Department of Cell and Developmental Biology
Street address Kitashirakawa, Sakyo-ku
City Kyoto
ZIP/Postal code 606-8502
Country Japan
 
Platform ID GPL1261
Series (1)
GSE7309 Requirement for ERK MAP kinase in mouse preimplantation development
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE GCRMA signal intensity

Data table
ID_REF VALUE
1415770_at 20.948465
1415771_at 2136.1775
1415772_at 294.08752
1415773_at 395.9717
1415774_at 28.239214
1415775_at 10101.777
1415776_at 62.21506
1415777_at 6.7195597
1415778_at 1436.3243
1415779_s_at 736.39984
1415780_a_at 7.965513
1415781_a_at 18526.47
1415782_at 7932.152
1415783_at 1691.0864
1415784_at 33.793774
1415785_a_at 987.41986
1415786_at 6.6296973
1415787_at 39.337135
1415788_at 257.45776
1415789_a_at 49.822517

Total number of rows: 45101

Table truncated, full table size 923 Kbytes.




Supplementary file Size Download File type/resource
GSM176484.CEL.gz 3.3 Mb (ftp)(http) CEL

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