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Sample GSM176493 Query DataSets for GSM176493
Status Public on Jun 04, 2007
Title embryo_released_at_day4.5_rep1
Sample type RNA
 
Source name Mouse preimplnatation embryos released from the U0126-induced arrest at day 4.5.
Organism Mus musculus
Characteristics Strain: ICR
Extracted molecule total RNA
Extraction protocol Total RNA was isolated by following the manual of ISOGEN (NIPPON GENE CO., LTD).
Label biotin
Label protocol Biotinylated cRNA were prepared according to the Affymetrix protocol (Two-Cycle Target Labeling Assays) from 0.1 ug total RNA.
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Mouse Genome 430 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using an Affymetrix GeneChip Scanner.
Description Gene expression data from embryos released from the U0126-induced arrest at day 4.5.
Data processing The data were analyzed with GCRMA algorithm
 
Submission date Mar 19, 2007
Last update date Aug 28, 2018
Contact name Eisuke Nishida
E-mail(s) nishida@lif.kyoto-u.ac.jp
Phone +81-75-753-4230
Organization name Graduate School of Biostudies, Kyoto University
Department Department of Cell and Developmental Biology
Street address Kitashirakawa, Sakyo-ku
City Kyoto
ZIP/Postal code 606-8502
Country Japan
 
Platform ID GPL1261
Series (1)
GSE7309 Requirement for ERK MAP kinase in mouse preimplantation development
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE GCRMA signal intensity

Data table
ID_REF VALUE
1415770_at 81.629616
1415771_at 6552.8843
1415772_at 684.57556
1415773_at 631.05615
1415774_at 155.95206
1415775_at 7557.6313
1415776_at 180.1252
1415777_at 6.5102153
1415778_at 2343.947
1415779_s_at 22137.996
1415780_a_at 6.796268
1415781_a_at 15266.078
1415782_at 9833.603
1415783_at 2851.5635
1415784_at 37.17902
1415785_a_at 4450.2383
1415786_at 6.1681156
1415787_at 136.35258
1415788_at 530.7181
1415789_a_at 74.877975

Total number of rows: 45101

Table truncated, full table size 923 Kbytes.




Supplementary file Size Download File type/resource
GSM176493.CEL.gz 3.3 Mb (ftp)(http) CEL

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