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Sample GSM176494 Query DataSets for GSM176494
Status Public on Jun 04, 2007
Title embryo_released_at_day4.5_rep2
Sample type RNA
 
Source name Mouse preimplnatation embryos released from the U0126-induced arrest at day 4.5.
Organism Mus musculus
Characteristics Strain: ICR
Extracted molecule total RNA
Extraction protocol Total RNA was isolated by following the manual of ISOGEN (NIPPON GENE CO., LTD).
Label biotin
Label protocol Biotinylated cRNA were prepared according to the Affymetrix protocol (Two-Cycle Target Labeling Assays) from 0.1 ug total RNA.
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Mouse Genome 430 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using an Affymetrix GeneChip Scanner.
Description Gene expression data from embryos released from the U0126-induced arrest at day 4.5.
Data processing The data were analyzed with GCRMA algorithm
 
Submission date Mar 19, 2007
Last update date Aug 28, 2018
Contact name Eisuke Nishida
E-mail(s) nishida@lif.kyoto-u.ac.jp
Phone +81-75-753-4230
Organization name Graduate School of Biostudies, Kyoto University
Department Department of Cell and Developmental Biology
Street address Kitashirakawa, Sakyo-ku
City Kyoto
ZIP/Postal code 606-8502
Country Japan
 
Platform ID GPL1261
Series (1)
GSE7309 Requirement for ERK MAP kinase in mouse preimplantation development
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE GCRMA signal intensity

Data table
ID_REF VALUE
1415770_at 55.88073
1415771_at 4749.5947
1415772_at 546.75244
1415773_at 556.4525
1415774_at 79.076645
1415775_at 7776.1343
1415776_at 166.51852
1415777_at 6.4447403
1415778_at 2015.9363
1415779_s_at 20448.736
1415780_a_at 7.329712
1415781_a_at 16881.836
1415782_at 9717.582
1415783_at 3473.5723
1415784_at 37.254566
1415785_a_at 3072.2654
1415786_at 6.9797373
1415787_at 104.188034
1415788_at 630.65155
1415789_a_at 92.53924

Total number of rows: 45101

Table truncated, full table size 923 Kbytes.




Supplementary file Size Download File type/resource
GSM176494.CEL.gz 3.5 Mb (ftp)(http) CEL

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