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Sample GSM176892 Query DataSets for GSM176892
Status Public on Jul 27, 2009
Title TregThy, rep1
Sample type RNA
 
Source name Treg cells isolated from the thymus
Organism Mus musculus
Characteristics Genetic background: BDC2.5/NOD
Age: 4-6 wks
Number of mice per chip: 3-6
Tissue: Thymus
Sort: (pre-sort depletion of CD8a by MACS) B220-, CD11b-, CD8a-, CD4+, CD25+
Extracted molecule total RNA
Extraction protocol RNA isolated with Trizol reagent and amplified twice with the MessageAmp aRNA Kit (Ambion)
Label Biotin
Label protocol BioArray High Yield RNA Transcript Labeling T7 Kit (Enzo Life Sciences)
 
Hybridization protocol Per Joslin Diabetes Center microarray core facility.
Scan protocol Per Joslin Diabetes Center microarray core facility.
Description jos3287.CEL
Data processing RMA
 
Submission date Mar 22, 2007
Last update date Aug 28, 2018
Contact name CBDM Lab
E-mail(s) cbdm@hms.harvard.edu
Phone 617-432-7747
Organization name Harvard Medical School
Department Microbiology and Immunobiology
Lab CBDM
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platform ID GPL1261
Series (2)
GSE7460 Contribution of Foxp3 to the Treg signature
GSE7852 Fat Treg cells
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE RMA-unlogged

Data table
ID_REF VALUE
1415670_at 323.2020905
1415671_at 587.5081119
1415672_at 2322.73196
1415673_at 484.6217402
1415674_a_at 333.2202073
1415675_at 487.0490769
1415676_a_at 1949.298746
1415677_at 205.3365827
1415678_at 958.6045035
1415679_at 3638.005
1415680_at 427.1615755
1415681_at 411.1161087
1415682_at 150.1742951
1415683_at 1458.797084
1415684_at 210.9802681
1415685_at 180.4700557
1415686_at 669.0800886
1415687_a_at 878.5171521
1415688_at 1632.260078
1415689_s_at 381.6282976

Total number of rows: 45101

Table truncated, full table size 1026 Kbytes.




Supplementary file Size Download File type/resource
GSM176892.CEL.gz 3.2 Mb (ftp)(http) CEL
Raw data provided as supplementary file
Processed data included within Sample table

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