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GEO accession:
Sample GSM176892
Query DataSets for GSM176892
Status
Public on Jul 27, 2009
Title
TregThy, rep1
Sample type
RNA
Source name
Treg cells isolated from the thymus
Organism
Mus musculus
Characteristics
Genetic background: BDC2.5/NOD
Age: 4-6 wks
Number of mice per chip: 3-6
Tissue: Thymus
Sort: (pre-sort depletion of CD8a by MACS) B220-, CD11b-, CD8a-, CD4+, CD25+
Extracted molecule
total RNA
Extraction protocol
RNA isolated with Trizol reagent and amplified twice with the MessageAmp aRNA Kit (Ambion)
Label
Biotin
Label protocol
BioArray High Yield RNA Transcript Labeling T7 Kit (Enzo Life Sciences)
Hybridization protocol
Per Joslin Diabetes Center microarray core facility.
Scan protocol
Per Joslin Diabetes Center microarray core facility.
Description
jos3287.CEL
Data processing
RMA
Submission date
Mar 22, 2007
Last update date
Aug 28, 2018
Contact name
CBDM Lab
E-mail(s)
cbdm@hms.harvard.edu
Phone
617-432-7747
Organization name
Harvard Medical School
Department
Microbiology and Immunobiology
Lab
CBDM
Street address
77 Avenue Louis Pasteur
City
Boston
State/province
MA
ZIP/Postal code
02215
Country
USA
Platform ID
GPL1261
Series (2)
GSE7460
Contribution of Foxp3 to the Treg signature
GSE7852
Fat Treg cells
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
VALUE
RMA-unlogged
Data table
ID_REF
VALUE
1415670_at
323.2020905
1415671_at
587.5081119
1415672_at
2322.73196
1415673_at
484.6217402
1415674_a_at
333.2202073
1415675_at
487.0490769
1415676_a_at
1949.298746
1415677_at
205.3365827
1415678_at
958.6045035
1415679_at
3638.005
1415680_at
427.1615755
1415681_at
411.1161087
1415682_at
150.1742951
1415683_at
1458.797084
1415684_at
210.9802681
1415685_at
180.4700557
1415686_at
669.0800886
1415687_a_at
878.5171521
1415688_at
1632.260078
1415689_s_at
381.6282976
Total number of rows:
45101
Table truncated, full table size
1026 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM176892.CEL.gz
3.2 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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