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GEO accession:
Sample GSM176893
Query DataSets for GSM176893
Status
Public on Jul 27, 2009
Title
TconvThy, rep1
Sample type
RNA
Source name
Tconv cells isolated from the thymus
Organism
Mus musculus
Characteristics
Genetic background: BDC2.5/NOD
Age: 4-6 wks
Number of mice per chip: 3-6
Tissue: Thymus
Sort: (pre-sort depletion of CD8a by MACS) B220-, CD11b-, CD8a-, CD4+, CD25-
Extracted molecule
total RNA
Extraction protocol
RNA isolated with Trizol reagent and amplified twice with the MessageAmp aRNA Kit (Ambion)
Label
Biotin
Label protocol
BioArray High Yield RNA Transcript Labeling T7 Kit (Enzo Life Sciences)
Hybridization protocol
Per Joslin Diabetes Center microarray core facility.
Scan protocol
Per Joslin Diabetes Center microarray core facility.
Description
jos3288.CEL
Data processing
RMA
Submission date
Mar 22, 2007
Last update date
Aug 28, 2018
Contact name
CBDM Lab
E-mail(s)
cbdm@hms.harvard.edu
Phone
617-432-7747
Organization name
Harvard Medical School
Department
Microbiology and Immunobiology
Lab
CBDM
Street address
77 Avenue Louis Pasteur
City
Boston
State/province
MA
ZIP/Postal code
02215
Country
USA
Platform ID
GPL1261
Series (2)
GSE7460
Contribution of Foxp3 to the Treg signature
GSE7852
Fat Treg cells
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
VALUE
RMA-unlogged
Data table
ID_REF
VALUE
1415670_at
202.4511605
1415671_at
519.8628917
1415672_at
3601.102559
1415673_at
263.511165
1415674_a_at
309.4885806
1415675_at
382.8190246
1415676_a_at
1291.177155
1415677_at
135.974298
1415678_at
911.0326046
1415679_at
3524.611821
1415680_at
309.4885806
1415681_at
269.4703262
1415682_at
158.8390246
1415683_at
1134.274295
1415684_at
184.3161363
1415685_at
138.5460943
1415686_at
840.2651397
1415687_a_at
1336.819051
1415688_at
1656.018916
1415689_s_at
383.1323255
Total number of rows:
45101
Table truncated, full table size
1026 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM176893.CEL.gz
3.1 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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